Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS06725 and ABZR87_RS06730 are separated by 229 nucleotides ABZR87_RS06730 and ABZR87_RS06735 are separated by 148 nucleotides ABZR87_RS06735 and ABZR87_RS06740 are separated by 68 nucleotides ABZR87_RS06740 and ABZR87_RS06745 are separated by 69 nucleotides
ABZR87_RS06725: ABZR87_RS06725 - phosphoenolpyruvate--protein phosphotransferase, at 1,429,074 to 1,430,825
_RS06725
ABZR87_RS06730: ABZR87_RS06730 - bacterioferritin-associated ferredoxin, at 1,431,055 to 1,431,330
_RS06730
ABZR87_RS06735: ABZR87_RS06735 - bacterioferritin, at 1,431,479 to 1,431,958
_RS06735
ABZR87_RS06740: ABZR87_RS06740 - molybdopterin-synthase adenylyltransferase MoeB, at 1,432,027 to 1,432,776
_RS06740
ABZR87_RS06745: ABZR87_RS06745 - S41 family peptidase, at 1,432,846 to 1,434,462
_RS06745
Position (kb)
1431
1432 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1430.484 kb on + strand, within ABZR87_RS06725 at 1430.485 kb on - strand, within ABZR87_RS06725 at 1430.485 kb on - strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.529 kb on + strand, within ABZR87_RS06725 at 1430.530 kb on - strand, within ABZR87_RS06725 at 1430.530 kb on - strand, within ABZR87_RS06725 at 1430.530 kb on - strand, within ABZR87_RS06725 at 1430.530 kb on - strand, within ABZR87_RS06725 at 1430.928 kb on + strand at 1430.929 kb on - strand at 1430.930 kb on + strand at 1430.930 kb on + strand at 1430.931 kb on - strand at 1431.011 kb on + strand at 1431.012 kb on - strand at 1431.022 kb on + strand at 1431.058 kb on + strand at 1431.058 kb on + strand at 1431.058 kb on + strand at 1431.058 kb on + strand at 1431.058 kb on + strand at 1431.058 kb on + strand at 1431.058 kb on + strand at 1431.059 kb on - strand at 1431.059 kb on - strand at 1431.059 kb on - strand at 1431.066 kb on + strand at 1431.066 kb on + strand at 1431.067 kb on - strand at 1431.067 kb on - strand at 1431.067 kb on - strand at 1431.067 kb on - strand at 1431.067 kb on - strand at 1431.067 kb on - strand at 1431.490 kb on + strand at 1431.490 kb on + strand at 1431.491 kb on - strand at 1431.491 kb on - strand at 1431.507 kb on - strand at 1431.551 kb on + strand, within ABZR87_RS06735 at 1431.551 kb on + strand, within ABZR87_RS06735 at 1431.551 kb on + strand, within ABZR87_RS06735 at 1431.552 kb on - strand, within ABZR87_RS06735 at 1431.552 kb on - strand, within ABZR87_RS06735 at 1431.552 kb on - strand, within ABZR87_RS06735 at 1431.572 kb on + strand, within ABZR87_RS06735 at 1431.572 kb on + strand, within ABZR87_RS06735 at 1431.572 kb on + strand, within ABZR87_RS06735 at 1431.572 kb on + strand, within ABZR87_RS06735 at 1431.573 kb on - strand, within ABZR87_RS06735 at 1431.573 kb on - strand, within ABZR87_RS06735 at 1431.573 kb on - strand, within ABZR87_RS06735 at 1431.573 kb on - strand, within ABZR87_RS06735 at 1431.611 kb on + strand, within ABZR87_RS06735 at 1431.611 kb on + strand, within ABZR87_RS06735 at 1431.611 kb on + strand, within ABZR87_RS06735 at 1431.611 kb on + strand, within ABZR87_RS06735 at 1431.611 kb on + strand, within ABZR87_RS06735 at 1431.611 kb on + strand, within ABZR87_RS06735 at 1431.612 kb on - strand, within ABZR87_RS06735 at 1431.612 kb on - strand, within ABZR87_RS06735 at 1431.612 kb on - strand, within ABZR87_RS06735 at 1431.612 kb on - strand, within ABZR87_RS06735 at 1431.612 kb on - strand, within ABZR87_RS06735 at 1431.797 kb on + strand, within ABZR87_RS06735 at 1431.797 kb on + strand, within ABZR87_RS06735 at 1431.818 kb on + strand, within ABZR87_RS06735 at 1431.818 kb on + strand, within ABZR87_RS06735 at 1431.818 kb on + strand, within ABZR87_RS06735 at 1431.818 kb on + strand, within ABZR87_RS06735 at 1431.819 kb on - strand, within ABZR87_RS06735 at 1431.819 kb on - strand, within ABZR87_RS06735 at 1431.819 kb on - strand, within ABZR87_RS06735 at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.923 kb on + strand at 1431.924 kb on - strand at 1431.924 kb on - strand at 1431.924 kb on - strand at 1431.956 kb on + strand at 1431.956 kb on + strand at 1431.956 kb on + strand at 1431.957 kb on - strand at 1431.957 kb on - strand at 1431.957 kb on - strand at 1432.817 kb on - strand at 1432.817 kb on - strand at 1432.847 kb on + strand at 1432.938 kb on + strand at 1432.938 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 1,430,484 + ABZR87_RS06725 0.80 -0.9 1,430,485 - ABZR87_RS06725 0.81 -0.2 1,430,485 - ABZR87_RS06725 0.81 -3.5 1,430,529 + ABZR87_RS06725 0.83 -3.8 1,430,529 + ABZR87_RS06725 0.83 -0.9 1,430,529 + ABZR87_RS06725 0.83 -1.1 1,430,529 + ABZR87_RS06725 0.83 -1.1 1,430,529 + ABZR87_RS06725 0.83 -1.0 1,430,529 + ABZR87_RS06725 0.83 -0.2 1,430,529 + ABZR87_RS06725 0.83 +1.2 1,430,529 + ABZR87_RS06725 0.83 -0.8 1,430,529 + ABZR87_RS06725 0.83 +0.4 1,430,530 - ABZR87_RS06725 0.83 +1.5 1,430,530 - ABZR87_RS06725 0.83 -1.9 1,430,530 - ABZR87_RS06725 0.83 -0.5 1,430,530 - ABZR87_RS06725 0.83 -1.9 1,430,928 + -0.5 1,430,929 - -0.8 1,430,930 + +1.7 1,430,930 + -0.2 1,430,931 - +2.2 1,431,011 + -1.8 1,431,012 - +0.9 1,431,022 + -1.6 1,431,058 + -2.2 1,431,058 + +0.9 1,431,058 + +2.4 1,431,058 + -1.1 1,431,058 + -1.5 1,431,058 + -3.4 1,431,058 + +1.4 1,431,059 - -0.6 1,431,059 - +0.1 1,431,059 - +1.5 1,431,066 + -0.5 1,431,066 + -2.3 1,431,067 - -0.3 1,431,067 - -0.2 1,431,067 - -1.6 1,431,067 - -0.6 1,431,067 - -2.4 1,431,067 - +0.2 1,431,490 + +2.3 1,431,490 + +1.4 1,431,491 - -0.3 1,431,491 - -1.2 1,431,507 - -0.7 1,431,551 + ABZR87_RS06735 0.15 -1.5 1,431,551 + ABZR87_RS06735 0.15 -2.3 1,431,551 + ABZR87_RS06735 0.15 +1.3 1,431,552 - ABZR87_RS06735 0.15 +2.1 1,431,552 - ABZR87_RS06735 0.15 +0.6 1,431,552 - ABZR87_RS06735 0.15 -1.0 1,431,572 + ABZR87_RS06735 0.19 -1.3 1,431,572 + ABZR87_RS06735 0.19 -0.3 1,431,572 + ABZR87_RS06735 0.19 +2.7 1,431,572 + ABZR87_RS06735 0.19 +2.1 1,431,573 - ABZR87_RS06735 0.20 -1.7 1,431,573 - ABZR87_RS06735 0.20 +0.6 1,431,573 - ABZR87_RS06735 0.20 -2.5 1,431,573 - ABZR87_RS06735 0.20 +1.0 1,431,611 + ABZR87_RS06735 0.28 +0.5 1,431,611 + ABZR87_RS06735 0.28 +0.6 1,431,611 + ABZR87_RS06735 0.28 -0.4 1,431,611 + ABZR87_RS06735 0.28 -3.0 1,431,611 + ABZR87_RS06735 0.28 -0.3 1,431,611 + ABZR87_RS06735 0.28 -1.6 1,431,612 - ABZR87_RS06735 0.28 -1.2 1,431,612 - ABZR87_RS06735 0.28 -3.1 1,431,612 - ABZR87_RS06735 0.28 +0.0 1,431,612 - ABZR87_RS06735 0.28 -0.2 1,431,612 - ABZR87_RS06735 0.28 -0.2 1,431,797 + ABZR87_RS06735 0.66 +1.9 1,431,797 + ABZR87_RS06735 0.66 +0.8 1,431,818 + ABZR87_RS06735 0.71 +1.7 1,431,818 + ABZR87_RS06735 0.71 -0.9 1,431,818 + ABZR87_RS06735 0.71 -0.1 1,431,818 + ABZR87_RS06735 0.71 -2.2 1,431,819 - ABZR87_RS06735 0.71 +0.1 1,431,819 - ABZR87_RS06735 0.71 +0.8 1,431,819 - ABZR87_RS06735 0.71 -0.7 1,431,923 + +0.2 1,431,923 + -0.7 1,431,923 + +0.3 1,431,923 + +0.3 1,431,923 + +2.6 1,431,923 + +1.4 1,431,924 - +1.5 1,431,924 - -1.0 1,431,924 - +2.3 1,431,956 + +0.2 1,431,956 + -1.1 1,431,956 + -1.1 1,431,957 - +1.9 1,431,957 - -1.0 1,431,957 - -0.7 1,432,817 - +1.8 1,432,817 - -2.4 1,432,847 + -0.2 1,432,938 + +1.1 1,432,938 + -2.8
Or see this region's nucleotide sequence