Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS03645 and ABZR87_RS03650 are separated by 127 nucleotides ABZR87_RS03650 and ABZR87_RS03655 are separated by 24 nucleotides ABZR87_RS03655 and ABZR87_RS03660 are separated by 68 nucleotides
ABZR87_RS03645: ABZR87_RS03645 - AraC family transcriptional regulator, at 762,363 to 763,334
_RS03645
ABZR87_RS03650: ABZR87_RS03650 - hypothetical protein, at 763,462 to 763,785
_RS03650
ABZR87_RS03655: ABZR87_RS03655 - EthD family reductase, at 763,810 to 764,136
_RS03655
ABZR87_RS03660: ABZR87_RS03660 - PhzF family phenazine biosynthesis protein, at 764,205 to 765,119
_RS03660
Position (kb) 763
764 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 762.462 kb on + strand, within ABZR87_RS03645 at 762.462 kb on + strand, within ABZR87_RS03645 at 762.462 kb on + strand, within ABZR87_RS03645 at 762.463 kb on - strand, within ABZR87_RS03645 at 762.463 kb on - strand, within ABZR87_RS03645 at 762.463 kb on - strand, within ABZR87_RS03645 at 762.463 kb on - strand, within ABZR87_RS03645 at 762.463 kb on - strand, within ABZR87_RS03645 at 762.534 kb on + strand, within ABZR87_RS03645 at 762.534 kb on + strand, within ABZR87_RS03645 at 762.535 kb on - strand, within ABZR87_RS03645 at 762.535 kb on - strand, within ABZR87_RS03645 at 762.535 kb on - strand, within ABZR87_RS03645 at 762.535 kb on - strand, within ABZR87_RS03645 at 762.535 kb on - strand, within ABZR87_RS03645 at 762.579 kb on + strand, within ABZR87_RS03645 at 762.579 kb on + strand, within ABZR87_RS03645 at 762.597 kb on + strand, within ABZR87_RS03645 at 762.597 kb on + strand, within ABZR87_RS03645 at 762.597 kb on + strand, within ABZR87_RS03645 at 762.598 kb on - strand, within ABZR87_RS03645 at 762.598 kb on - strand, within ABZR87_RS03645 at 762.598 kb on - strand, within ABZR87_RS03645 at 762.603 kb on + strand, within ABZR87_RS03645 at 762.604 kb on - strand, within ABZR87_RS03645 at 762.604 kb on - strand, within ABZR87_RS03645 at 762.618 kb on + strand, within ABZR87_RS03645 at 762.619 kb on - strand, within ABZR87_RS03645 at 762.619 kb on - strand, within ABZR87_RS03645 at 762.619 kb on - strand, within ABZR87_RS03645 at 762.619 kb on - strand, within ABZR87_RS03645 at 762.619 kb on - strand, within ABZR87_RS03645 at 762.693 kb on + strand, within ABZR87_RS03645 at 762.694 kb on - strand, within ABZR87_RS03645 at 762.694 kb on - strand, within ABZR87_RS03645 at 762.823 kb on + strand, within ABZR87_RS03645 at 762.824 kb on - strand, within ABZR87_RS03645 at 762.897 kb on + strand, within ABZR87_RS03645 at 762.898 kb on - strand, within ABZR87_RS03645 at 762.898 kb on - strand, within ABZR87_RS03645 at 762.971 kb on + strand, within ABZR87_RS03645 at 763.005 kb on + strand, within ABZR87_RS03645 at 763.005 kb on + strand, within ABZR87_RS03645 at 763.006 kb on - strand, within ABZR87_RS03645 at 763.006 kb on - strand, within ABZR87_RS03645 at 763.006 kb on - strand, within ABZR87_RS03645 at 763.110 kb on + strand, within ABZR87_RS03645 at 763.110 kb on + strand, within ABZR87_RS03645 at 763.110 kb on + strand, within ABZR87_RS03645 at 763.110 kb on + strand, within ABZR87_RS03645 at 763.110 kb on + strand, within ABZR87_RS03645 at 763.111 kb on - strand, within ABZR87_RS03645 at 763.111 kb on - strand, within ABZR87_RS03645 at 763.111 kb on - strand, within ABZR87_RS03645 at 763.111 kb on - strand, within ABZR87_RS03645 at 763.111 kb on - strand, within ABZR87_RS03645 at 763.114 kb on + strand, within ABZR87_RS03645 at 763.114 kb on + strand, within ABZR87_RS03645 at 763.114 kb on + strand, within ABZR87_RS03645 at 763.114 kb on + strand, within ABZR87_RS03645 at 763.114 kb on + strand, within ABZR87_RS03645 at 763.115 kb on - strand, within ABZR87_RS03645 at 763.115 kb on - strand, within ABZR87_RS03645 at 763.115 kb on - strand, within ABZR87_RS03645 at 763.115 kb on - strand, within ABZR87_RS03645 at 763.115 kb on - strand, within ABZR87_RS03645 at 763.115 kb on - strand, within ABZR87_RS03645 at 763.115 kb on - strand, within ABZR87_RS03645 at 763.197 kb on + strand, within ABZR87_RS03645 at 763.197 kb on + strand, within ABZR87_RS03645 at 763.198 kb on - strand, within ABZR87_RS03645 at 763.198 kb on - strand, within ABZR87_RS03645 at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.317 kb on + strand at 763.318 kb on - strand at 763.318 kb on - strand at 763.318 kb on - strand at 763.318 kb on - strand at 763.318 kb on - strand at 763.342 kb on + strand at 763.343 kb on - strand at 763.343 kb on - strand at 763.343 kb on - strand at 763.343 kb on - strand at 763.343 kb on - strand at 763.463 kb on + strand at 763.464 kb on - strand at 763.481 kb on + strand at 763.481 kb on + strand at 763.482 kb on - strand at 763.485 kb on + strand at 763.517 kb on + strand, within ABZR87_RS03650 at 763.538 kb on + strand, within ABZR87_RS03650 at 763.539 kb on - strand, within ABZR87_RS03650 at 763.539 kb on - strand, within ABZR87_RS03650 at 763.562 kb on + strand, within ABZR87_RS03650 at 763.562 kb on + strand, within ABZR87_RS03650 at 763.563 kb on - strand, within ABZR87_RS03650 at 763.563 kb on - strand, within ABZR87_RS03650 at 763.590 kb on - strand, within ABZR87_RS03650 at 763.673 kb on + strand, within ABZR87_RS03650 at 763.673 kb on + strand, within ABZR87_RS03650 at 763.674 kb on - strand, within ABZR87_RS03650 at 763.698 kb on - strand, within ABZR87_RS03650 at 763.760 kb on + strand at 763.760 kb on + strand at 763.760 kb on + strand at 763.760 kb on + strand at 763.760 kb on + strand at 763.761 kb on - strand at 763.761 kb on - strand at 763.761 kb on - strand at 763.761 kb on - strand at 763.761 kb on - strand at 763.871 kb on + strand, within ABZR87_RS03655 at 763.871 kb on + strand, within ABZR87_RS03655 at 763.871 kb on + strand, within ABZR87_RS03655 at 763.871 kb on + strand, within ABZR87_RS03655 at 763.871 kb on + strand, within ABZR87_RS03655 at 763.872 kb on - strand, within ABZR87_RS03655 at 763.872 kb on - strand, within ABZR87_RS03655 at 763.872 kb on - strand, within ABZR87_RS03655 at 763.872 kb on - strand, within ABZR87_RS03655 at 763.925 kb on + strand, within ABZR87_RS03655 at 763.925 kb on + strand, within ABZR87_RS03655 at 763.925 kb on + strand, within ABZR87_RS03655 at 763.926 kb on - strand, within ABZR87_RS03655 at 763.926 kb on - strand, within ABZR87_RS03655 at 763.967 kb on + strand, within ABZR87_RS03655 at 763.967 kb on + strand, within ABZR87_RS03655 at 763.967 kb on + strand, within ABZR87_RS03655 at 763.968 kb on - strand, within ABZR87_RS03655 at 764.008 kb on - strand, within ABZR87_RS03655 at 764.018 kb on + strand, within ABZR87_RS03655 at 764.018 kb on + strand, within ABZR87_RS03655 at 764.018 kb on + strand, within ABZR87_RS03655 at 764.018 kb on + strand, within ABZR87_RS03655 at 764.018 kb on + strand, within ABZR87_RS03655 at 764.018 kb on + strand, within ABZR87_RS03655 at 764.019 kb on - strand, within ABZR87_RS03655 at 764.019 kb on - strand, within ABZR87_RS03655 at 764.019 kb on - strand, within ABZR87_RS03655 at 764.019 kb on - strand, within ABZR87_RS03655 at 764.021 kb on + strand, within ABZR87_RS03655 at 764.021 kb on + strand, within ABZR87_RS03655 at 764.021 kb on + strand, within ABZR87_RS03655 at 764.022 kb on - strand, within ABZR87_RS03655 at 764.022 kb on - strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.078 kb on + strand, within ABZR87_RS03655 at 764.079 kb on - strand, within ABZR87_RS03655 at 764.079 kb on - strand, within ABZR87_RS03655 at 764.079 kb on - strand, within ABZR87_RS03655 at 764.079 kb on - strand, within ABZR87_RS03655 at 764.079 kb on - strand, within ABZR87_RS03655 at 764.079 kb on - strand, within ABZR87_RS03655 at 764.108 kb on + strand at 764.114 kb on + strand at 764.114 kb on + strand at 764.115 kb on - strand at 764.115 kb on - strand at 764.115 kb on - strand at 764.248 kb on - strand at 764.444 kb on + strand, within ABZR87_RS03660 at 764.444 kb on + strand, within ABZR87_RS03660 at 764.444 kb on + strand, within ABZR87_RS03660 at 764.445 kb on - strand, within ABZR87_RS03660 at 764.445 kb on - strand, within ABZR87_RS03660 at 764.506 kb on + strand, within ABZR87_RS03660 at 764.512 kb on + strand, within ABZR87_RS03660 at 764.512 kb on + strand, within ABZR87_RS03660 at 764.512 kb on + strand, within ABZR87_RS03660 at 764.551 kb on + strand, within ABZR87_RS03660 at 764.551 kb on + strand, within ABZR87_RS03660 at 764.568 kb on + strand, within ABZR87_RS03660 at 764.619 kb on + strand, within ABZR87_RS03660
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 762,462 + ABZR87_RS03645 0.10 +2.6 762,462 + ABZR87_RS03645 0.10 +0.2 762,462 + ABZR87_RS03645 0.10 +0.2 762,463 - ABZR87_RS03645 0.10 +1.0 762,463 - ABZR87_RS03645 0.10 -0.3 762,463 - ABZR87_RS03645 0.10 +1.2 762,463 - ABZR87_RS03645 0.10 +1.0 762,463 - ABZR87_RS03645 0.10 -2.4 762,534 + ABZR87_RS03645 0.18 +1.1 762,534 + ABZR87_RS03645 0.18 -1.1 762,535 - ABZR87_RS03645 0.18 +1.1 762,535 - ABZR87_RS03645 0.18 -0.1 762,535 - ABZR87_RS03645 0.18 -3.0 762,535 - ABZR87_RS03645 0.18 -0.3 762,535 - ABZR87_RS03645 0.18 -0.2 762,579 + ABZR87_RS03645 0.22 -1.9 762,579 + ABZR87_RS03645 0.22 -0.5 762,597 + ABZR87_RS03645 0.24 +2.4 762,597 + ABZR87_RS03645 0.24 -1.5 762,597 + ABZR87_RS03645 0.24 +0.8 762,598 - ABZR87_RS03645 0.24 +1.7 762,598 - ABZR87_RS03645 0.24 -1.9 762,598 - ABZR87_RS03645 0.24 +0.3 762,603 + ABZR87_RS03645 0.25 -2.8 762,604 - ABZR87_RS03645 0.25 -0.8 762,604 - ABZR87_RS03645 0.25 -2.6 762,618 + ABZR87_RS03645 0.26 -2.6 762,619 - ABZR87_RS03645 0.26 -1.1 762,619 - ABZR87_RS03645 0.26 +0.1 762,619 - ABZR87_RS03645 0.26 +1.5 762,619 - ABZR87_RS03645 0.26 -1.6 762,619 - ABZR87_RS03645 0.26 +1.8 762,693 + ABZR87_RS03645 0.34 +0.3 762,694 - ABZR87_RS03645 0.34 +0.2 762,694 - ABZR87_RS03645 0.34 -1.1 762,823 + ABZR87_RS03645 0.47 +1.4 762,824 - ABZR87_RS03645 0.47 -2.1 762,897 + ABZR87_RS03645 0.55 +0.6 762,898 - ABZR87_RS03645 0.55 +1.4 762,898 - ABZR87_RS03645 0.55 +2.2 762,971 + ABZR87_RS03645 0.63 -2.4 763,005 + ABZR87_RS03645 0.66 +1.3 763,005 + ABZR87_RS03645 0.66 -1.0 763,006 - ABZR87_RS03645 0.66 -0.3 763,006 - ABZR87_RS03645 0.66 -2.6 763,006 - ABZR87_RS03645 0.66 -2.5 763,110 + ABZR87_RS03645 0.77 -2.1 763,110 + ABZR87_RS03645 0.77 +1.5 763,110 + ABZR87_RS03645 0.77 +0.4 763,110 + ABZR87_RS03645 0.77 -0.3 763,110 + ABZR87_RS03645 0.77 -0.5 763,111 - ABZR87_RS03645 0.77 -1.5 763,111 - ABZR87_RS03645 0.77 +0.9 763,111 - ABZR87_RS03645 0.77 -1.0 763,111 - ABZR87_RS03645 0.77 +1.0 763,111 - ABZR87_RS03645 0.77 +1.1 763,114 + ABZR87_RS03645 0.77 -0.3 763,114 + ABZR87_RS03645 0.77 -1.4 763,114 + ABZR87_RS03645 0.77 -1.8 763,114 + ABZR87_RS03645 0.77 -0.2 763,114 + ABZR87_RS03645 0.77 +0.1 763,115 - ABZR87_RS03645 0.77 -1.0 763,115 - ABZR87_RS03645 0.77 +0.1 763,115 - ABZR87_RS03645 0.77 -1.1 763,115 - ABZR87_RS03645 0.77 -1.1 763,115 - ABZR87_RS03645 0.77 +0.1 763,115 - ABZR87_RS03645 0.77 +0.9 763,115 - ABZR87_RS03645 0.77 +0.9 763,197 + ABZR87_RS03645 0.86 +1.7 763,197 + ABZR87_RS03645 0.86 -1.2 763,198 - ABZR87_RS03645 0.86 +1.8 763,198 - ABZR87_RS03645 0.86 +3.8 763,317 + +1.1 763,317 + +1.4 763,317 + -2.6 763,317 + +2.1 763,317 + -0.7 763,317 + +2.2 763,317 + -3.2 763,317 + -1.0 763,317 + -1.0 763,317 + +0.6 763,318 - +0.8 763,318 - -2.0 763,318 - +0.6 763,318 - +1.4 763,318 - +0.2 763,342 + -2.2 763,343 - -2.7 763,343 - -2.6 763,343 - -0.4 763,343 - -1.3 763,343 - +2.6 763,463 + -1.7 763,464 - -4.2 763,481 + -2.5 763,481 + -2.7 763,482 - -1.7 763,485 + +0.3 763,517 + ABZR87_RS03650 0.17 +1.7 763,538 + ABZR87_RS03650 0.23 +0.7 763,539 - ABZR87_RS03650 0.24 -1.8 763,539 - ABZR87_RS03650 0.24 -3.1 763,562 + ABZR87_RS03650 0.31 -1.6 763,562 + ABZR87_RS03650 0.31 -1.2 763,563 - ABZR87_RS03650 0.31 +1.2 763,563 - ABZR87_RS03650 0.31 +1.3 763,590 - ABZR87_RS03650 0.40 -1.5 763,673 + ABZR87_RS03650 0.65 +2.0 763,673 + ABZR87_RS03650 0.65 +0.5 763,674 - ABZR87_RS03650 0.65 +0.8 763,698 - ABZR87_RS03650 0.73 +1.3 763,760 + -0.2 763,760 + +1.5 763,760 + -2.7 763,760 + +1.3 763,760 + -1.8 763,761 - +2.6 763,761 - -0.7 763,761 - +1.0 763,761 - -2.2 763,761 - -0.4 763,871 + ABZR87_RS03655 0.19 +0.2 763,871 + ABZR87_RS03655 0.19 +0.9 763,871 + ABZR87_RS03655 0.19 -0.3 763,871 + ABZR87_RS03655 0.19 -0.2 763,871 + ABZR87_RS03655 0.19 -0.8 763,872 - ABZR87_RS03655 0.19 -0.8 763,872 - ABZR87_RS03655 0.19 -2.6 763,872 - ABZR87_RS03655 0.19 -0.3 763,872 - ABZR87_RS03655 0.19 +0.6 763,925 + ABZR87_RS03655 0.35 -1.3 763,925 + ABZR87_RS03655 0.35 +0.4 763,925 + ABZR87_RS03655 0.35 -0.8 763,926 - ABZR87_RS03655 0.35 -0.4 763,926 - ABZR87_RS03655 0.35 +2.3 763,967 + ABZR87_RS03655 0.48 +1.5 763,967 + ABZR87_RS03655 0.48 +0.4 763,967 + ABZR87_RS03655 0.48 +2.1 763,968 - ABZR87_RS03655 0.48 +2.2 764,008 - ABZR87_RS03655 0.61 +1.0 764,018 + ABZR87_RS03655 0.64 -3.3 764,018 + ABZR87_RS03655 0.64 -3.1 764,018 + ABZR87_RS03655 0.64 -1.5 764,018 + ABZR87_RS03655 0.64 -2.1 764,018 + ABZR87_RS03655 0.64 -1.3 764,018 + ABZR87_RS03655 0.64 +0.5 764,019 - ABZR87_RS03655 0.64 +0.1 764,019 - ABZR87_RS03655 0.64 +2.0 764,019 - ABZR87_RS03655 0.64 -2.7 764,019 - ABZR87_RS03655 0.64 +0.6 764,021 + ABZR87_RS03655 0.65 -0.8 764,021 + ABZR87_RS03655 0.65 -1.6 764,021 + ABZR87_RS03655 0.65 +1.3 764,022 - ABZR87_RS03655 0.65 -2.8 764,022 - ABZR87_RS03655 0.65 +0.8 764,078 + ABZR87_RS03655 0.82 -1.2 764,078 + ABZR87_RS03655 0.82 +1.7 764,078 + ABZR87_RS03655 0.82 -2.0 764,078 + ABZR87_RS03655 0.82 -0.2 764,078 + ABZR87_RS03655 0.82 +1.9 764,078 + ABZR87_RS03655 0.82 -0.0 764,078 + ABZR87_RS03655 0.82 +1.8 764,078 + ABZR87_RS03655 0.82 -0.1 764,078 + ABZR87_RS03655 0.82 -2.2 764,079 - ABZR87_RS03655 0.82 -3.4 764,079 - ABZR87_RS03655 0.82 -1.3 764,079 - ABZR87_RS03655 0.82 -0.5 764,079 - ABZR87_RS03655 0.82 +1.2 764,079 - ABZR87_RS03655 0.82 -1.1 764,079 - ABZR87_RS03655 0.82 -0.5 764,108 + +1.5 764,114 + +0.1 764,114 + -0.4 764,115 - +0.1 764,115 - +1.0 764,115 - +0.1 764,248 - -2.7 764,444 + ABZR87_RS03660 0.26 -2.9 764,444 + ABZR87_RS03660 0.26 +1.1 764,444 + ABZR87_RS03660 0.26 +0.7 764,445 - ABZR87_RS03660 0.26 +0.3 764,445 - ABZR87_RS03660 0.26 -0.2 764,506 + ABZR87_RS03660 0.33 -2.3 764,512 + ABZR87_RS03660 0.34 -1.2 764,512 + ABZR87_RS03660 0.34 +0.6 764,512 + ABZR87_RS03660 0.34 +0.3 764,551 + ABZR87_RS03660 0.38 -1.8 764,551 + ABZR87_RS03660 0.38 -1.8 764,568 + ABZR87_RS03660 0.40 -0.3 764,619 + ABZR87_RS03660 0.45 -1.1
Or see this region's nucleotide sequence