Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS01690

Experiment: 4-Hydroxybenzoic Acid (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABZR87_RS01690 and ABZR87_RS01695 are separated by 132 nucleotides ABZR87_RS01690: ABZR87_RS01690 - collagen-like triple helix repeat-containing protein, at 354,942 to 355,742 _RS01690 ABZR87_RS01695: ABZR87_RS01695 - collagen-like triple helix repeat-containing protein, at 355,875 to 357,032 _RS01695 Position (kb) 354 355 356Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 354.125 kb on + strandat 354.125 kb on + strandat 354.125 kb on + strandat 354.125 kb on + strandat 354.125 kb on + strandat 354.125 kb on + strandat 354.125 kb on + strandat 354.125 kb on + strandat 354.126 kb on - strandat 354.126 kb on - strandat 354.126 kb on - strandat 354.126 kb on - strandat 354.126 kb on - strandat 354.126 kb on - strandat 354.126 kb on - strandat 354.126 kb on - strandat 354.169 kb on + strandat 354.169 kb on + strandat 354.170 kb on - strandat 354.201 kb on + strandat 354.202 kb on - strandat 354.202 kb on - strandat 354.202 kb on - strandat 354.583 kb on - strandat 354.590 kb on + strandat 354.590 kb on + strandat 354.590 kb on + strandat 354.590 kb on + strandat 354.591 kb on - strandat 354.591 kb on - strandat 354.604 kb on + strandat 354.927 kb on + strandat 354.928 kb on - strandat 355.505 kb on + strand, within ABZR87_RS01690at 355.679 kb on + strandat 355.679 kb on + strandat 355.679 kb on + strandat 355.679 kb on + strandat 355.679 kb on + strandat 355.740 kb on + strandat 355.741 kb on - strandat 355.741 kb on - strandat 355.741 kb on - strandat 355.741 kb on - strandat 355.741 kb on - strandat 355.754 kb on + strandat 355.755 kb on - strandat 355.755 kb on - strandat 355.795 kb on + strandat 355.839 kb on + strandat 355.859 kb on + strandat 355.859 kb on + strandat 355.860 kb on - strandat 355.860 kb on - strandat 355.860 kb on - strandat 355.860 kb on - strandat 355.860 kb on - strandat 356.015 kb on + strand, within ABZR87_RS01695at 356.015 kb on + strand, within ABZR87_RS01695at 356.015 kb on + strand, within ABZR87_RS01695at 356.016 kb on - strand, within ABZR87_RS01695at 356.016 kb on - strand, within ABZR87_RS01695at 356.016 kb on - strand, within ABZR87_RS01695at 356.016 kb on - strand, within ABZR87_RS01695at 356.016 kb on - strand, within ABZR87_RS01695at 356.016 kb on - strand, within ABZR87_RS01695at 356.622 kb on - strand, within ABZR87_RS01695at 356.622 kb on - strand, within ABZR87_RS01695

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Per-strain Table

Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C)
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354,125 + -0.1
354,125 + -1.2
354,125 + -0.6
354,125 + -3.3
354,125 + -0.7
354,125 + -0.8
354,125 + -1.9
354,125 + -1.6
354,126 - -2.3
354,126 - -1.5
354,126 - -1.3
354,126 - -0.1
354,126 - -0.0
354,126 - -0.9
354,126 - +0.1
354,126 - +2.1
354,169 + +1.6
354,169 + -0.2
354,170 - -2.4
354,201 + -1.3
354,202 - +2.3
354,202 - -1.4
354,202 - +0.3
354,583 - +0.2
354,590 + +1.8
354,590 + +0.8
354,590 + -2.0
354,590 + +1.5
354,591 - -0.1
354,591 - +1.4
354,604 + -0.3
354,927 + +2.6
354,928 - +1.4
355,505 + ABZR87_RS01690 0.70 -2.0
355,679 + -3.0
355,679 + +0.6
355,679 + +2.1
355,679 + +0.9
355,679 + +1.7
355,740 + +1.1
355,741 - -2.3
355,741 - -3.3
355,741 - -3.1
355,741 - +1.7
355,741 - +2.3
355,754 + +1.4
355,755 - -0.2
355,755 - +1.3
355,795 + +1.2
355,839 + -0.4
355,859 + +0.2
355,859 + -0.8
355,860 - -0.1
355,860 - +0.9
355,860 - +0.3
355,860 - +1.0
355,860 - -1.5
356,015 + ABZR87_RS01695 0.12 -1.8
356,015 + ABZR87_RS01695 0.12 -1.1
356,015 + ABZR87_RS01695 0.12 +1.9
356,016 - ABZR87_RS01695 0.12 -3.3
356,016 - ABZR87_RS01695 0.12 -2.1
356,016 - ABZR87_RS01695 0.12 +1.7
356,016 - ABZR87_RS01695 0.12 -0.3
356,016 - ABZR87_RS01695 0.12 -0.1
356,016 - ABZR87_RS01695 0.12 -1.5
356,622 - ABZR87_RS01695 0.65 +0.4
356,622 - ABZR87_RS01695 0.65 +0.4

Or see this region's nucleotide sequence