Experiment: 4-Hydroxybenzoic Acid (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ABZR87_RS01365 and ABZR87_RS01370 are separated by 19 nucleotides ABZR87_RS01370 and ABZR87_RS01375 are separated by 7 nucleotides
ABZR87_RS01365: ABZR87_RS01365 - class I SAM-dependent methyltransferase PhcB, at 284,851 to 286,263
_RS01365
ABZR87_RS01370: ABZR87_RS01370 - ATP-binding protein, at 286,283 to 287,611
_RS01370
ABZR87_RS01375: ABZR87_RS01375 - two-component system hybrid sensor histidine kinase/response regulator PhcR, at 287,619 to 288,725
_RS01375
Position (kb) 286
287
288 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 285.376 kb on + strand, within ABZR87_RS01365 at 285.376 kb on + strand, within ABZR87_RS01365 at 285.376 kb on + strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.377 kb on - strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.490 kb on + strand, within ABZR87_RS01365 at 285.491 kb on - strand, within ABZR87_RS01365 at 285.491 kb on - strand, within ABZR87_RS01365 at 285.491 kb on - strand, within ABZR87_RS01365 at 285.499 kb on + strand, within ABZR87_RS01365 at 285.499 kb on + strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.500 kb on - strand, within ABZR87_RS01365 at 285.517 kb on + strand, within ABZR87_RS01365 at 285.529 kb on + strand, within ABZR87_RS01365 at 285.530 kb on - strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.580 kb on + strand, within ABZR87_RS01365 at 285.581 kb on - strand, within ABZR87_RS01365 at 285.581 kb on - strand, within ABZR87_RS01365 at 285.661 kb on + strand, within ABZR87_RS01365 at 285.661 kb on + strand, within ABZR87_RS01365 at 285.662 kb on - strand, within ABZR87_RS01365 at 285.662 kb on - strand, within ABZR87_RS01365 at 285.662 kb on - strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.826 kb on + strand, within ABZR87_RS01365 at 285.827 kb on - strand, within ABZR87_RS01365 at 285.967 kb on + strand, within ABZR87_RS01365 at 285.967 kb on + strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.968 kb on - strand, within ABZR87_RS01365 at 285.988 kb on + strand, within ABZR87_RS01365 at 285.988 kb on + strand, within ABZR87_RS01365 at 285.989 kb on - strand, within ABZR87_RS01365 at 285.989 kb on - strand, within ABZR87_RS01365 at 285.989 kb on - strand, within ABZR87_RS01365 at 286.025 kb on - strand, within ABZR87_RS01365 at 286.123 kb on + strand at 286.123 kb on + strand at 286.124 kb on - strand at 286.124 kb on - strand at 286.192 kb on + strand at 286.194 kb on + strand at 286.217 kb on + strand at 286.217 kb on + strand at 286.217 kb on + strand at 286.218 kb on - strand at 286.261 kb on + strand at 286.294 kb on + strand at 286.294 kb on + strand at 286.295 kb on - strand at 286.401 kb on - strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.409 kb on + strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.410 kb on - strand at 286.487 kb on + strand, within ABZR87_RS01370 at 286.488 kb on - strand, within ABZR87_RS01370 at 286.488 kb on - strand, within ABZR87_RS01370 at 286.488 kb on - strand, within ABZR87_RS01370 at 286.571 kb on + strand, within ABZR87_RS01370 at 286.571 kb on + strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.572 kb on - strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.598 kb on + strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.599 kb on - strand, within ABZR87_RS01370 at 286.601 kb on + strand, within ABZR87_RS01370 at 286.601 kb on + strand, within ABZR87_RS01370 at 286.601 kb on + strand, within ABZR87_RS01370 at 286.625 kb on + strand, within ABZR87_RS01370 at 286.625 kb on + strand, within ABZR87_RS01370 at 286.626 kb on - strand, within ABZR87_RS01370 at 286.626 kb on - strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.688 kb on + strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.689 kb on - strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.799 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.805 kb on + strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 286.806 kb on - strand, within ABZR87_RS01370 at 287.132 kb on + strand, within ABZR87_RS01370 at 287.133 kb on - strand, within ABZR87_RS01370 at 287.295 kb on + strand, within ABZR87_RS01370 at 287.296 kb on - strand, within ABZR87_RS01370 at 287.517 kb on - strand at 287.652 kb on + strand at 287.653 kb on - strand at 287.653 kb on - strand at 287.709 kb on + strand at 287.883 kb on + strand, within ABZR87_RS01375 at 287.883 kb on + strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.884 kb on - strand, within ABZR87_RS01375 at 287.952 kb on + strand, within ABZR87_RS01375 at 287.953 kb on - strand, within ABZR87_RS01375 at 288.205 kb on - strand, within ABZR87_RS01375 at 288.205 kb on - strand, within ABZR87_RS01375 at 288.253 kb on - strand, within ABZR87_RS01375 at 288.253 kb on - strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.321 kb on + strand, within ABZR87_RS01375 at 288.322 kb on - strand, within ABZR87_RS01375 at 288.322 kb on - strand, within ABZR87_RS01375 at 288.357 kb on + strand, within ABZR87_RS01375
Per-strain Table
Position Strand Gene LocusTag Fraction 4-Hydroxybenzoic Acid (C) remove 285,376 + ABZR87_RS01365 0.37 +1.8 285,376 + ABZR87_RS01365 0.37 +1.4 285,376 + ABZR87_RS01365 0.37 -2.0 285,377 - ABZR87_RS01365 0.37 +1.4 285,377 - ABZR87_RS01365 0.37 +0.2 285,377 - ABZR87_RS01365 0.37 -1.5 285,377 - ABZR87_RS01365 0.37 +3.0 285,377 - ABZR87_RS01365 0.37 +2.3 285,377 - ABZR87_RS01365 0.37 +2.0 285,490 + ABZR87_RS01365 0.45 -0.3 285,490 + ABZR87_RS01365 0.45 -0.2 285,490 + ABZR87_RS01365 0.45 -0.9 285,490 + ABZR87_RS01365 0.45 -2.8 285,491 - ABZR87_RS01365 0.45 +1.0 285,491 - ABZR87_RS01365 0.45 +2.4 285,491 - ABZR87_RS01365 0.45 +1.8 285,499 + ABZR87_RS01365 0.46 +2.6 285,499 + ABZR87_RS01365 0.46 +0.4 285,500 - ABZR87_RS01365 0.46 -2.5 285,500 - ABZR87_RS01365 0.46 -0.2 285,500 - ABZR87_RS01365 0.46 +2.6 285,500 - ABZR87_RS01365 0.46 -0.6 285,500 - ABZR87_RS01365 0.46 +0.7 285,500 - ABZR87_RS01365 0.46 +2.5 285,517 + ABZR87_RS01365 0.47 +0.1 285,529 + ABZR87_RS01365 0.48 +0.3 285,530 - ABZR87_RS01365 0.48 +3.5 285,580 + ABZR87_RS01365 0.52 -1.2 285,580 + ABZR87_RS01365 0.52 -2.7 285,580 + ABZR87_RS01365 0.52 -1.0 285,580 + ABZR87_RS01365 0.52 +1.9 285,581 - ABZR87_RS01365 0.52 +2.7 285,581 - ABZR87_RS01365 0.52 -1.1 285,661 + ABZR87_RS01365 0.57 +0.5 285,661 + ABZR87_RS01365 0.57 +0.2 285,662 - ABZR87_RS01365 0.57 +2.5 285,662 - ABZR87_RS01365 0.57 +2.4 285,662 - ABZR87_RS01365 0.57 +2.9 285,826 + ABZR87_RS01365 0.69 +0.7 285,826 + ABZR87_RS01365 0.69 -0.8 285,826 + ABZR87_RS01365 0.69 -0.0 285,826 + ABZR87_RS01365 0.69 +1.8 285,827 - ABZR87_RS01365 0.69 +2.6 285,967 + ABZR87_RS01365 0.79 -1.8 285,967 + ABZR87_RS01365 0.79 -2.5 285,968 - ABZR87_RS01365 0.79 +2.5 285,968 - ABZR87_RS01365 0.79 +0.3 285,968 - ABZR87_RS01365 0.79 +1.6 285,968 - ABZR87_RS01365 0.79 -2.3 285,988 + ABZR87_RS01365 0.80 -0.8 285,988 + ABZR87_RS01365 0.80 -0.5 285,989 - ABZR87_RS01365 0.81 +1.0 285,989 - ABZR87_RS01365 0.81 +2.4 285,989 - ABZR87_RS01365 0.81 +2.2 286,025 - ABZR87_RS01365 0.83 +1.7 286,123 + +0.2 286,123 + -3.0 286,124 - +4.2 286,124 - +2.0 286,192 + -2.5 286,194 + -1.6 286,217 + -1.5 286,217 + +1.9 286,217 + +0.1 286,218 - +2.3 286,261 + -2.7 286,294 + +2.8 286,294 + +2.3 286,295 - +1.9 286,401 - +2.8 286,409 + +1.8 286,409 + +2.4 286,409 + +3.9 286,409 + +2.1 286,409 + +2.6 286,409 + +2.3 286,410 - +3.3 286,410 - +1.5 286,410 - +0.2 286,410 - +1.1 286,410 - +1.5 286,410 - +4.4 286,410 - +1.7 286,410 - +2.8 286,410 - +2.9 286,487 + ABZR87_RS01370 0.15 -2.4 286,488 - ABZR87_RS01370 0.15 -0.9 286,488 - ABZR87_RS01370 0.15 +1.4 286,488 - ABZR87_RS01370 0.15 +0.0 286,571 + ABZR87_RS01370 0.22 -2.2 286,571 + ABZR87_RS01370 0.22 +1.9 286,572 - ABZR87_RS01370 0.22 +2.0 286,572 - ABZR87_RS01370 0.22 +3.1 286,572 - ABZR87_RS01370 0.22 +1.2 286,572 - ABZR87_RS01370 0.22 +3.2 286,598 + ABZR87_RS01370 0.24 +1.1 286,598 + ABZR87_RS01370 0.24 +0.2 286,598 + ABZR87_RS01370 0.24 +1.8 286,598 + ABZR87_RS01370 0.24 -2.1 286,599 - ABZR87_RS01370 0.24 +2.6 286,599 - ABZR87_RS01370 0.24 +1.3 286,599 - ABZR87_RS01370 0.24 +1.4 286,599 - ABZR87_RS01370 0.24 +1.9 286,601 + ABZR87_RS01370 0.24 +0.1 286,601 + ABZR87_RS01370 0.24 +0.3 286,601 + ABZR87_RS01370 0.24 -1.5 286,625 + ABZR87_RS01370 0.26 +0.0 286,625 + ABZR87_RS01370 0.26 +0.8 286,626 - ABZR87_RS01370 0.26 -1.1 286,626 - ABZR87_RS01370 0.26 +2.3 286,688 + ABZR87_RS01370 0.30 +2.1 286,688 + ABZR87_RS01370 0.30 +1.6 286,688 + ABZR87_RS01370 0.30 +0.5 286,688 + ABZR87_RS01370 0.30 +0.0 286,688 + ABZR87_RS01370 0.30 +0.4 286,689 - ABZR87_RS01370 0.31 +2.7 286,689 - ABZR87_RS01370 0.31 +3.3 286,689 - ABZR87_RS01370 0.31 -3.2 286,689 - ABZR87_RS01370 0.31 +2.3 286,689 - ABZR87_RS01370 0.31 +2.4 286,689 - ABZR87_RS01370 0.31 +2.7 286,689 - ABZR87_RS01370 0.31 +1.3 286,689 - ABZR87_RS01370 0.31 -1.0 286,689 - ABZR87_RS01370 0.31 +3.4 286,689 - ABZR87_RS01370 0.31 +1.7 286,799 + ABZR87_RS01370 0.39 +0.6 286,799 + ABZR87_RS01370 0.39 -2.0 286,799 + ABZR87_RS01370 0.39 -2.5 286,799 + ABZR87_RS01370 0.39 -1.1 286,805 + ABZR87_RS01370 0.39 -1.7 286,805 + ABZR87_RS01370 0.39 +0.4 286,805 + ABZR87_RS01370 0.39 +0.6 286,805 + ABZR87_RS01370 0.39 +1.3 286,806 - ABZR87_RS01370 0.39 +1.6 286,806 - ABZR87_RS01370 0.39 +2.6 286,806 - ABZR87_RS01370 0.39 +2.6 286,806 - ABZR87_RS01370 0.39 -0.4 286,806 - ABZR87_RS01370 0.39 +2.5 286,806 - ABZR87_RS01370 0.39 +2.7 286,806 - ABZR87_RS01370 0.39 +3.0 287,132 + ABZR87_RS01370 0.64 +1.6 287,133 - ABZR87_RS01370 0.64 +2.5 287,295 + ABZR87_RS01370 0.76 +0.2 287,296 - ABZR87_RS01370 0.76 +1.1 287,517 - +3.1 287,652 + +0.6 287,653 - +1.2 287,653 - +2.7 287,709 + +1.7 287,883 + ABZR87_RS01375 0.24 +0.8 287,883 + ABZR87_RS01375 0.24 +2.7 287,884 - ABZR87_RS01375 0.24 +1.2 287,884 - ABZR87_RS01375 0.24 +1.6 287,884 - ABZR87_RS01375 0.24 +2.1 287,884 - ABZR87_RS01375 0.24 +0.3 287,952 + ABZR87_RS01375 0.30 +2.8 287,953 - ABZR87_RS01375 0.30 +2.5 288,205 - ABZR87_RS01375 0.53 +3.6 288,205 - ABZR87_RS01375 0.53 +2.2 288,253 - ABZR87_RS01375 0.57 -1.8 288,253 - ABZR87_RS01375 0.57 -1.2 288,321 + ABZR87_RS01375 0.63 +2.8 288,321 + ABZR87_RS01375 0.63 +2.1 288,321 + ABZR87_RS01375 0.63 +2.6 288,321 + ABZR87_RS01375 0.63 +2.7 288,322 - ABZR87_RS01375 0.64 +3.4 288,322 - ABZR87_RS01375 0.64 +3.0 288,357 + ABZR87_RS01375 0.67 +2.2
Or see this region's nucleotide sequence