Experiment: Chlorite 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Shew_0943 and Shew_0944 are separated by 56 nucleotides Shew_0944 and Shew_0945 are separated by 372 nucleotides Shew_0945 and Shew_0946 are separated by 54 nucleotides
Shew_0943: Shew_0943 - hypothetical protein (RefSeq), at 1,084,147 to 1,084,407
_0943
Shew_0944: Shew_0944 - GCN5-related N-acetyltransferase (RefSeq), at 1,084,464 to 1,084,976
_0944
Shew_0945: Shew_0945 - hypothetical protein (RefSeq), at 1,085,349 to 1,085,984
_0945
Shew_0946: Shew_0946 - band 7 protein (RefSeq), at 1,086,039 to 1,087,826
_0946
Position (kb) 1085
1086 Strain fitness (log2 ratio) -1
0
1 at 1084.547 kb on - strand, within Shew_0944 at 1085.032 kb on + strand at 1085.057 kb on - strand at 1085.080 kb on + strand at 1085.144 kb on - strand at 1085.184 kb on - strand at 1085.421 kb on + strand, within Shew_0945 at 1085.573 kb on - strand, within Shew_0945 at 1085.678 kb on + strand, within Shew_0945 at 1085.956 kb on - strand at 1086.113 kb on - strand at 1086.742 kb on + strand, within Shew_0946 at 1086.742 kb on + strand, within Shew_0946
Per-strain Table
Position Strand Gene LocusTag Fraction Chlorite 200 mM remove 1,084,547 - Shew_0944 0.16 +0.2 1,085,032 + -0.2 1,085,057 - -0.2 1,085,080 + -0.1 1,085,144 - +0.1 1,085,184 - -0.1 1,085,421 + Shew_0945 0.11 +0.7 1,085,573 - Shew_0945 0.35 +1.0 1,085,678 + Shew_0945 0.52 -0.0 1,085,956 - +0.3 1,086,113 - -0.6 1,086,742 + Shew_0946 0.39 +0.1 1,086,742 + Shew_0946 0.39 -0.6
Or see this region's nucleotide sequence