Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31415 and AZOBR_RS31420 are separated by 285 nucleotides AZOBR_RS31420 and AZOBR_RS31425 are separated by 209 nucleotides
AZOBR_RS31415: AZOBR_RS31415 - GntR family transcriptional regulator, at 415,601 to 416,383
_RS31415
AZOBR_RS31420: AZOBR_RS31420 - methylglyoxal synthase, at 416,669 to 417,103
_RS31420
AZOBR_RS31425: AZOBR_RS31425 - glucuronate isomerase, at 417,313 to 418,716
_RS31425
Position (kb) 416
417
418 Strain fitness (log2 ratio) -2
-1
0
1
2 at 415.687 kb on - strand, within AZOBR_RS31415 at 415.687 kb on - strand, within AZOBR_RS31415 at 415.687 kb on - strand, within AZOBR_RS31415 at 415.687 kb on - strand, within AZOBR_RS31415 at 416.178 kb on + strand, within AZOBR_RS31415 at 416.179 kb on - strand, within AZOBR_RS31415 at 416.259 kb on + strand, within AZOBR_RS31415 at 416.259 kb on + strand, within AZOBR_RS31415 at 416.507 kb on + strand at 416.509 kb on + strand at 416.509 kb on + strand at 416.509 kb on + strand at 416.510 kb on - strand at 416.510 kb on - strand at 416.510 kb on - strand at 416.513 kb on - strand at 416.513 kb on - strand at 416.513 kb on - strand at 416.513 kb on - strand at 416.610 kb on + strand at 416.619 kb on - strand at 416.981 kb on + strand, within AZOBR_RS31420 at 416.981 kb on + strand, within AZOBR_RS31420 at 416.982 kb on - strand, within AZOBR_RS31420 at 417.204 kb on - strand at 417.494 kb on - strand, within AZOBR_RS31425 at 417.511 kb on + strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 417.512 kb on - strand, within AZOBR_RS31425 at 418.015 kb on + strand, within AZOBR_RS31425
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 415,687 - AZOBR_RS31415 0.11 +1.2 415,687 - AZOBR_RS31415 0.11 -0.8 415,687 - AZOBR_RS31415 0.11 -2.0 415,687 - AZOBR_RS31415 0.11 -1.8 416,178 + AZOBR_RS31415 0.74 -0.7 416,179 - AZOBR_RS31415 0.74 -0.0 416,259 + AZOBR_RS31415 0.84 -0.2 416,259 + AZOBR_RS31415 0.84 -0.4 416,507 + +2.0 416,509 + -0.9 416,509 + -1.0 416,509 + +0.2 416,510 - -0.4 416,510 - +0.1 416,510 - -0.2 416,513 - -0.6 416,513 - -1.8 416,513 - -0.4 416,513 - +0.2 416,610 + +0.2 416,619 - +1.2 416,981 + AZOBR_RS31420 0.72 -0.6 416,981 + AZOBR_RS31420 0.72 +0.8 416,982 - AZOBR_RS31420 0.72 -0.5 417,204 - -0.2 417,494 - AZOBR_RS31425 0.13 -0.3 417,511 + AZOBR_RS31425 0.14 -0.8 417,512 - AZOBR_RS31425 0.14 -0.7 417,512 - AZOBR_RS31425 0.14 +1.0 417,512 - AZOBR_RS31425 0.14 -0.2 417,512 - AZOBR_RS31425 0.14 -0.8 418,015 + AZOBR_RS31425 0.50 -0.1
Or see this region's nucleotide sequence