Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS31190 and AZOBR_RS31195 are separated by 89 nucleotides AZOBR_RS31195 and AZOBR_RS31200 are separated by 6 nucleotides AZOBR_RS31200 and AZOBR_RS31205 are separated by 4 nucleotides
AZOBR_RS31190: AZOBR_RS31190 - 50S ribosomal protein L25, at 362,182 to 362,793
_RS31190
AZOBR_RS31195: AZOBR_RS31195 - peptidyl-tRNA hydrolase, at 362,883 to 363,458
_RS31195
AZOBR_RS31200: AZOBR_RS31200 - sugar ABC transporter permease, at 363,465 to 364,442
_RS31200
AZOBR_RS31205: AZOBR_RS31205 - sugar ABC transporter permease, at 364,447 to 365,511
_RS31205
Position (kb) 363
364
365 Strain fitness (log2 ratio) -1
0
1 at 362.853 kb on + strand at 363.457 kb on - strand at 363.601 kb on + strand, within AZOBR_RS31200 at 363.601 kb on + strand, within AZOBR_RS31200 at 363.602 kb on - strand, within AZOBR_RS31200 at 363.602 kb on - strand, within AZOBR_RS31200 at 363.653 kb on - strand, within AZOBR_RS31200 at 363.653 kb on - strand, within AZOBR_RS31200 at 363.658 kb on + strand, within AZOBR_RS31200 at 363.751 kb on + strand, within AZOBR_RS31200 at 363.803 kb on - strand, within AZOBR_RS31200 at 363.803 kb on - strand, within AZOBR_RS31200 at 363.803 kb on - strand, within AZOBR_RS31200 at 364.853 kb on + strand, within AZOBR_RS31205 at 364.853 kb on + strand, within AZOBR_RS31205 at 364.853 kb on + strand, within AZOBR_RS31205 at 364.854 kb on - strand, within AZOBR_RS31205 at 365.094 kb on + strand, within AZOBR_RS31205
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 362,853 + -0.5 363,457 - +0.6 363,601 + AZOBR_RS31200 0.14 -0.7 363,601 + AZOBR_RS31200 0.14 +0.0 363,602 - AZOBR_RS31200 0.14 +0.1 363,602 - AZOBR_RS31200 0.14 +0.6 363,653 - AZOBR_RS31200 0.19 -1.1 363,653 - AZOBR_RS31200 0.19 -0.1 363,658 + AZOBR_RS31200 0.20 -0.6 363,751 + AZOBR_RS31200 0.29 -0.3 363,803 - AZOBR_RS31200 0.35 +0.3 363,803 - AZOBR_RS31200 0.35 -1.1 363,803 - AZOBR_RS31200 0.35 +0.6 364,853 + AZOBR_RS31205 0.38 -0.1 364,853 + AZOBR_RS31205 0.38 +0.0 364,853 + AZOBR_RS31205 0.38 -0.0 364,854 - AZOBR_RS31205 0.38 +0.4 365,094 + AZOBR_RS31205 0.61 +0.5
Or see this region's nucleotide sequence