Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30610 and AZOBR_RS30615 are separated by 98 nucleotides AZOBR_RS30615 and AZOBR_RS30620 are separated by 484 nucleotides AZOBR_RS30620 and AZOBR_RS30625 are separated by 5 nucleotides
AZOBR_RS30610: AZOBR_RS30610 - acetyl-CoA acetyltransferase, at 223,910 to 225,085
_RS30610
AZOBR_RS30615: AZOBR_RS30615 - acetoacetyl-CoA reductase, at 225,184 to 225,906
_RS30615
AZOBR_RS30620: AZOBR_RS30620 - hypothetical protein, at 226,391 to 226,792
_RS30620
AZOBR_RS30625: AZOBR_RS30625 - MFS transporter, at 226,798 to 228,033
_RS30625
Position (kb) 225
226 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 224.370 kb on - strand, within AZOBR_RS30610 at 224.993 kb on + strand at 224.994 kb on - strand at 224.994 kb on - strand at 225.126 kb on + strand at 225.127 kb on - strand at 225.127 kb on - strand at 225.127 kb on - strand at 225.262 kb on + strand, within AZOBR_RS30615 at 225.263 kb on - strand, within AZOBR_RS30615 at 225.281 kb on - strand, within AZOBR_RS30615 at 225.337 kb on + strand, within AZOBR_RS30615 at 225.338 kb on - strand, within AZOBR_RS30615 at 225.608 kb on - strand at 225.622 kb on + strand, within AZOBR_RS30615 at 225.623 kb on - strand, within AZOBR_RS30615 at 225.718 kb on + strand at 225.718 kb on + strand, within AZOBR_RS30615 at 225.901 kb on + strand at 225.901 kb on + strand at 225.902 kb on - strand at 225.902 kb on - strand at 226.315 kb on + strand at 226.316 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 224,370 - AZOBR_RS30610 0.39 -1.9 224,993 + +0.5 224,994 - -0.5 224,994 - -1.5 225,126 + -1.0 225,127 - +0.7 225,127 - -0.0 225,127 - -2.5 225,262 + AZOBR_RS30615 0.11 -0.8 225,263 - AZOBR_RS30615 0.11 -1.4 225,281 - AZOBR_RS30615 0.13 -3.5 225,337 + AZOBR_RS30615 0.21 -0.3 225,338 - AZOBR_RS30615 0.21 +0.6 225,608 - +0.6 225,622 + AZOBR_RS30615 0.61 +0.6 225,623 - AZOBR_RS30615 0.61 -1.0 225,718 + -0.5 225,718 + AZOBR_RS30615 0.74 +0.5 225,901 + -0.6 225,901 + -1.2 225,902 - -0.4 225,902 - +0.5 226,315 + +0.1 226,316 - +3.4
Or see this region's nucleotide sequence