Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29985 and AZOBR_RS29990 are separated by 303 nucleotides AZOBR_RS29990 and AZOBR_RS29995 are separated by 28 nucleotides AZOBR_RS29995 and AZOBR_RS30000 are separated by 99 nucleotides
AZOBR_RS29985: AZOBR_RS29985 - pyruvate oxidase, at 67,441 to 69,195
_RS29985
AZOBR_RS29990: AZOBR_RS29990 - putative dioxygenase subunit, at 69,499 to 70,425
_RS29990
AZOBR_RS29995: AZOBR_RS29995 - PAS sensor protein, at 70,454 to 70,879
_RS29995
AZOBR_RS30000: AZOBR_RS30000 - exported protein of unknown function, at 70,979 to 71,308
_RS30000
Position (kb) 69
70
71 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 68.814 kb on - strand, within AZOBR_RS29985 at 68.864 kb on + strand, within AZOBR_RS29985 at 68.864 kb on + strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.865 kb on - strand, within AZOBR_RS29985 at 68.886 kb on - strand, within AZOBR_RS29985 at 68.886 kb on - strand, within AZOBR_RS29985 at 68.936 kb on + strand, within AZOBR_RS29985 at 68.937 kb on - strand, within AZOBR_RS29985 at 68.937 kb on - strand, within AZOBR_RS29985 at 69.335 kb on - strand at 69.458 kb on + strand at 69.459 kb on - strand at 69.459 kb on - strand at 69.514 kb on - strand at 69.514 kb on - strand at 69.638 kb on - strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.892 kb on + strand, within AZOBR_RS29990 at 69.893 kb on - strand, within AZOBR_RS29990 at 70.040 kb on - strand, within AZOBR_RS29990 at 70.658 kb on + strand, within AZOBR_RS29995 at 70.659 kb on - strand, within AZOBR_RS29995 at 70.659 kb on - strand, within AZOBR_RS29995 at 70.947 kb on + strand at 70.947 kb on + strand at 71.178 kb on - strand, within AZOBR_RS30000 at 71.180 kb on - strand, within AZOBR_RS30000 at 71.192 kb on + strand, within AZOBR_RS30000 at 71.408 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 68,814 - AZOBR_RS29985 0.78 -0.4 68,864 + AZOBR_RS29985 0.81 +1.9 68,864 + AZOBR_RS29985 0.81 -1.9 68,865 - AZOBR_RS29985 0.81 +0.6 68,865 - AZOBR_RS29985 0.81 +0.2 68,865 - AZOBR_RS29985 0.81 -0.1 68,865 - AZOBR_RS29985 0.81 +2.0 68,886 - AZOBR_RS29985 0.82 -0.8 68,886 - AZOBR_RS29985 0.82 +0.7 68,936 + AZOBR_RS29985 0.85 +0.4 68,937 - AZOBR_RS29985 0.85 -1.1 68,937 - AZOBR_RS29985 0.85 -2.0 69,335 - -0.3 69,458 + +1.5 69,459 - -2.9 69,459 - +0.5 69,514 - +0.2 69,514 - +0.3 69,638 - AZOBR_RS29990 0.15 -0.4 69,892 + AZOBR_RS29990 0.42 -0.1 69,892 + AZOBR_RS29990 0.42 -1.0 69,892 + AZOBR_RS29990 0.42 -1.1 69,893 - AZOBR_RS29990 0.43 -0.4 70,040 - AZOBR_RS29990 0.58 -0.3 70,658 + AZOBR_RS29995 0.48 +0.3 70,659 - AZOBR_RS29995 0.48 -0.0 70,659 - AZOBR_RS29995 0.48 +0.7 70,947 + +0.0 70,947 + +0.4 71,178 - AZOBR_RS30000 0.60 +0.2 71,180 - AZOBR_RS30000 0.61 -1.1 71,192 + AZOBR_RS30000 0.65 +0.8 71,408 - +0.6
Or see this region's nucleotide sequence