Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS28305 and AZOBR_RS28310 are separated by 543 nucleotides AZOBR_RS28310 and AZOBR_RS28315 are separated by 4 nucleotides AZOBR_RS28315 and AZOBR_RS28320 are separated by 204 nucleotides
AZOBR_RS28305: AZOBR_RS28305 - histidine kinase, at 520,001 to 521,959
_RS28305
AZOBR_RS28310: AZOBR_RS28310 - hypothetical protein, at 522,503 to 522,919
_RS28310
AZOBR_RS28315: AZOBR_RS28315 - hypothetical protein, at 522,924 to 523,853
_RS28315
AZOBR_RS28320: AZOBR_RS28320 - hypothetical protein, at 524,058 to 525,119
_RS28320
Position (kb) 522
523
524 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 522.917 kb on + strand at 522.918 kb on - strand at 522.918 kb on - strand at 522.918 kb on - strand at 522.948 kb on + strand at 522.948 kb on + strand at 522.953 kb on + strand at 523.236 kb on + strand, within AZOBR_RS28315 at 523.281 kb on + strand, within AZOBR_RS28315 at 523.281 kb on + strand, within AZOBR_RS28315 at 523.281 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.521 kb on + strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.522 kb on - strand, within AZOBR_RS28315 at 523.593 kb on - strand, within AZOBR_RS28315 at 523.879 kb on + strand at 523.880 kb on - strand at 524.259 kb on - strand, within AZOBR_RS28320 at 524.259 kb on - strand, within AZOBR_RS28320 at 524.259 kb on - strand, within AZOBR_RS28320 at 524.259 kb on - strand, within AZOBR_RS28320 at 524.259 kb on - strand, within AZOBR_RS28320 at 524.466 kb on + strand, within AZOBR_RS28320 at 524.466 kb on + strand, within AZOBR_RS28320 at 524.466 kb on + strand, within AZOBR_RS28320 at 524.467 kb on - strand, within AZOBR_RS28320 at 524.508 kb on + strand, within AZOBR_RS28320 at 524.508 kb on + strand, within AZOBR_RS28320 at 524.508 kb on + strand, within AZOBR_RS28320 at 524.509 kb on - strand, within AZOBR_RS28320 at 524.509 kb on - strand, within AZOBR_RS28320 at 524.818 kb on - strand, within AZOBR_RS28320 at 524.848 kb on - strand, within AZOBR_RS28320
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 522,917 + -2.2 522,918 - +1.3 522,918 - -2.2 522,918 - +0.6 522,948 + -0.0 522,948 + +0.5 522,953 + -3.3 523,236 + AZOBR_RS28315 0.34 +0.3 523,281 + AZOBR_RS28315 0.38 +0.6 523,281 + AZOBR_RS28315 0.38 +0.1 523,281 + AZOBR_RS28315 0.38 -0.8 523,521 + AZOBR_RS28315 0.64 -0.5 523,521 + AZOBR_RS28315 0.64 +0.6 523,521 + AZOBR_RS28315 0.64 +0.1 523,521 + AZOBR_RS28315 0.64 +0.1 523,521 + AZOBR_RS28315 0.64 +0.4 523,521 + AZOBR_RS28315 0.64 +1.1 523,521 + AZOBR_RS28315 0.64 +0.9 523,521 + AZOBR_RS28315 0.64 -0.0 523,522 - AZOBR_RS28315 0.64 -0.4 523,522 - AZOBR_RS28315 0.64 +0.9 523,522 - AZOBR_RS28315 0.64 +0.8 523,522 - AZOBR_RS28315 0.64 +0.3 523,522 - AZOBR_RS28315 0.64 +0.7 523,522 - AZOBR_RS28315 0.64 +0.3 523,522 - AZOBR_RS28315 0.64 -0.8 523,522 - AZOBR_RS28315 0.64 +1.2 523,522 - AZOBR_RS28315 0.64 +0.3 523,593 - AZOBR_RS28315 0.72 +2.0 523,879 + -0.6 523,880 - +0.3 524,259 - AZOBR_RS28320 0.19 -0.1 524,259 - AZOBR_RS28320 0.19 -2.8 524,259 - AZOBR_RS28320 0.19 +0.7 524,259 - AZOBR_RS28320 0.19 -0.0 524,259 - AZOBR_RS28320 0.19 -0.0 524,466 + AZOBR_RS28320 0.38 +0.3 524,466 + AZOBR_RS28320 0.38 +0.1 524,466 + AZOBR_RS28320 0.38 +1.0 524,467 - AZOBR_RS28320 0.39 +0.4 524,508 + AZOBR_RS28320 0.42 -0.3 524,508 + AZOBR_RS28320 0.42 +0.8 524,508 + AZOBR_RS28320 0.42 +0.3 524,509 - AZOBR_RS28320 0.42 +1.5 524,509 - AZOBR_RS28320 0.42 -1.6 524,818 - AZOBR_RS28320 0.72 -0.0 524,848 - AZOBR_RS28320 0.74 -0.4
Or see this region's nucleotide sequence