Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27830 and AZOBR_RS27835 are separated by 68 nucleotides AZOBR_RS27835 and AZOBR_RS27840 are separated by 47 nucleotides AZOBR_RS27840 and AZOBR_RS27845 overlap by 4 nucleotides
AZOBR_RS27830: AZOBR_RS27830 - proline racemase, at 413,088 to 414,101
_RS27830
AZOBR_RS27835: AZOBR_RS27835 - polyamine ABC transporter permease, at 414,170 to 414,958
_RS27835
AZOBR_RS27840: AZOBR_RS27840 - polyamine ABC transporter permease, at 415,006 to 415,818
_RS27840
AZOBR_RS27845: AZOBR_RS27845 - polyamine ABC transporter ATPase, at 415,815 to 416,912
_RS27845
Position (kb) 414
415 Strain fitness (log2 ratio) -2
-1
0
1 at 413.383 kb on + strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.578 kb on + strand, within AZOBR_RS27830 at 413.579 kb on - strand, within AZOBR_RS27830 at 413.657 kb on - strand, within AZOBR_RS27830 at 413.861 kb on - strand at 413.968 kb on + strand, within AZOBR_RS27830 at 414.020 kb on - strand at 414.070 kb on + strand at 414.285 kb on + strand, within AZOBR_RS27835 at 414.285 kb on + strand, within AZOBR_RS27835 at 414.286 kb on - strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.295 kb on - strand, within AZOBR_RS27835 at 414.295 kb on - strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.604 kb on - strand, within AZOBR_RS27835 at 414.604 kb on - strand, within AZOBR_RS27835 at 414.789 kb on + strand, within AZOBR_RS27835 at 414.855 kb on + strand, within AZOBR_RS27835 at 414.855 kb on + strand, within AZOBR_RS27835 at 414.909 kb on + strand at 414.909 kb on + strand at 415.064 kb on + strand at 415.089 kb on - strand, within AZOBR_RS27840 at 415.154 kb on + strand, within AZOBR_RS27840 at 415.154 kb on + strand, within AZOBR_RS27840 at 415.155 kb on - strand, within AZOBR_RS27840 at 415.343 kb on + strand, within AZOBR_RS27840 at 415.344 kb on - strand, within AZOBR_RS27840 at 415.559 kb on + strand, within AZOBR_RS27840 at 415.560 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.670 kb on + strand, within AZOBR_RS27840 at 415.670 kb on + strand, within AZOBR_RS27840 at 415.671 kb on - strand, within AZOBR_RS27840
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 413,383 + AZOBR_RS27830 0.29 +0.1 413,384 - AZOBR_RS27830 0.29 -1.3 413,384 - AZOBR_RS27830 0.29 -0.4 413,384 - AZOBR_RS27830 0.29 -0.5 413,384 - AZOBR_RS27830 0.29 -2.1 413,578 + AZOBR_RS27830 0.48 +0.9 413,579 - AZOBR_RS27830 0.48 +0.7 413,657 - AZOBR_RS27830 0.56 +0.4 413,861 - -0.9 413,968 + AZOBR_RS27830 0.87 -0.1 414,020 - +0.4 414,070 + +0.5 414,285 + AZOBR_RS27835 0.15 -0.4 414,285 + AZOBR_RS27835 0.15 +0.0 414,286 - AZOBR_RS27835 0.15 -0.6 414,294 + AZOBR_RS27835 0.16 -0.4 414,294 + AZOBR_RS27835 0.16 -1.7 414,294 + AZOBR_RS27835 0.16 -2.6 414,295 - AZOBR_RS27835 0.16 -0.0 414,295 - AZOBR_RS27835 0.16 -1.4 414,603 + AZOBR_RS27835 0.55 -1.1 414,603 + AZOBR_RS27835 0.55 +0.6 414,603 + AZOBR_RS27835 0.55 +0.9 414,604 - AZOBR_RS27835 0.55 +0.1 414,604 - AZOBR_RS27835 0.55 -1.9 414,789 + AZOBR_RS27835 0.78 -0.1 414,855 + AZOBR_RS27835 0.87 +1.3 414,855 + AZOBR_RS27835 0.87 -0.3 414,909 + +0.1 414,909 + -0.3 415,064 + +0.4 415,089 - AZOBR_RS27840 0.10 -2.7 415,154 + AZOBR_RS27840 0.18 +1.0 415,154 + AZOBR_RS27840 0.18 -1.4 415,155 - AZOBR_RS27840 0.18 -0.2 415,343 + AZOBR_RS27840 0.41 -0.7 415,344 - AZOBR_RS27840 0.42 -0.8 415,559 + AZOBR_RS27840 0.68 -0.8 415,560 - AZOBR_RS27840 0.68 +0.7 415,563 - AZOBR_RS27840 0.69 -0.9 415,563 - AZOBR_RS27840 0.69 -0.1 415,563 - AZOBR_RS27840 0.69 -0.5 415,563 - AZOBR_RS27840 0.69 -0.7 415,670 + AZOBR_RS27840 0.82 +0.7 415,670 + AZOBR_RS27840 0.82 +1.1 415,671 - AZOBR_RS27840 0.82 +0.3
Or see this region's nucleotide sequence