Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27820 and AZOBR_RS27825 are separated by 252 nucleotides AZOBR_RS27825 and AZOBR_RS27830 are separated by 128 nucleotides AZOBR_RS27830 and AZOBR_RS27835 are separated by 68 nucleotides AZOBR_RS27835 and AZOBR_RS27840 are separated by 47 nucleotides
AZOBR_RS27820: AZOBR_RS27820 - carboxyvinyl-carboxyphosphonate phosphorylmutase, at 411,223 to 412,095
_RS27820
AZOBR_RS27825: AZOBR_RS27825 - hypothetical protein, at 412,348 to 412,959
_RS27825
AZOBR_RS27830: AZOBR_RS27830 - proline racemase, at 413,088 to 414,101
_RS27830
AZOBR_RS27835: AZOBR_RS27835 - polyamine ABC transporter permease, at 414,170 to 414,958
_RS27835
AZOBR_RS27840: AZOBR_RS27840 - polyamine ABC transporter permease, at 415,006 to 415,818
_RS27840
Position (kb) 413
414
415 Strain fitness (log2 ratio) -2
-1
0
1 at 412.142 kb on - strand at 412.203 kb on - strand at 412.811 kb on - strand, within AZOBR_RS27825 at 413.064 kb on + strand at 413.078 kb on + strand at 413.383 kb on + strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.578 kb on + strand, within AZOBR_RS27830 at 413.579 kb on - strand, within AZOBR_RS27830 at 413.657 kb on - strand, within AZOBR_RS27830 at 413.861 kb on - strand at 413.968 kb on + strand, within AZOBR_RS27830 at 414.020 kb on - strand at 414.070 kb on + strand at 414.285 kb on + strand, within AZOBR_RS27835 at 414.285 kb on + strand, within AZOBR_RS27835 at 414.286 kb on - strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.295 kb on - strand, within AZOBR_RS27835 at 414.295 kb on - strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.604 kb on - strand, within AZOBR_RS27835 at 414.604 kb on - strand, within AZOBR_RS27835 at 414.789 kb on + strand, within AZOBR_RS27835 at 414.855 kb on + strand, within AZOBR_RS27835 at 414.855 kb on + strand, within AZOBR_RS27835 at 414.909 kb on + strand at 414.909 kb on + strand at 415.064 kb on + strand at 415.089 kb on - strand, within AZOBR_RS27840
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 412,142 - -0.5 412,203 - +0.7 412,811 - AZOBR_RS27825 0.76 -1.2 413,064 + +0.6 413,078 + +0.6 413,383 + AZOBR_RS27830 0.29 +0.1 413,384 - AZOBR_RS27830 0.29 -1.3 413,384 - AZOBR_RS27830 0.29 -0.4 413,384 - AZOBR_RS27830 0.29 -0.5 413,384 - AZOBR_RS27830 0.29 -2.1 413,578 + AZOBR_RS27830 0.48 +0.9 413,579 - AZOBR_RS27830 0.48 +0.7 413,657 - AZOBR_RS27830 0.56 +0.4 413,861 - -0.9 413,968 + AZOBR_RS27830 0.87 -0.1 414,020 - +0.4 414,070 + +0.5 414,285 + AZOBR_RS27835 0.15 -0.4 414,285 + AZOBR_RS27835 0.15 +0.0 414,286 - AZOBR_RS27835 0.15 -0.6 414,294 + AZOBR_RS27835 0.16 -0.4 414,294 + AZOBR_RS27835 0.16 -1.7 414,294 + AZOBR_RS27835 0.16 -2.6 414,295 - AZOBR_RS27835 0.16 -0.0 414,295 - AZOBR_RS27835 0.16 -1.4 414,603 + AZOBR_RS27835 0.55 -1.1 414,603 + AZOBR_RS27835 0.55 +0.6 414,603 + AZOBR_RS27835 0.55 +0.9 414,604 - AZOBR_RS27835 0.55 +0.1 414,604 - AZOBR_RS27835 0.55 -1.9 414,789 + AZOBR_RS27835 0.78 -0.1 414,855 + AZOBR_RS27835 0.87 +1.3 414,855 + AZOBR_RS27835 0.87 -0.3 414,909 + +0.1 414,909 + -0.3 415,064 + +0.4 415,089 - AZOBR_RS27840 0.10 -2.7
Or see this region's nucleotide sequence