Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26815 and AZOBR_RS26820 are separated by 30 nucleotides AZOBR_RS26820 and AZOBR_RS26825 are separated by 34 nucleotides
AZOBR_RS26815: AZOBR_RS26815 - 3-hydroxyisobutyrate dehydrogenase, at 165,984 to 166,883
_RS26815
AZOBR_RS26820: AZOBR_RS26820 - ABC transporter permease, at 166,914 to 168,113
_RS26820
AZOBR_RS26825: AZOBR_RS26825 - aldehyde dehydrogenase, at 168,148 to 169,632
_RS26825
Position (kb) 166
167
168
169 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 165.947 kb on - strand at 165.958 kb on + strand at 165.959 kb on - strand at 165.959 kb on - strand at 165.970 kb on + strand at 165.970 kb on + strand at 165.970 kb on + strand at 165.971 kb on - strand at 166.070 kb on - strand at 166.070 kb on - strand at 166.180 kb on + strand, within AZOBR_RS26815 at 166.180 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.228 kb on + strand, within AZOBR_RS26815 at 166.229 kb on - strand, within AZOBR_RS26815 at 166.229 kb on - strand, within AZOBR_RS26815 at 166.229 kb on - strand, within AZOBR_RS26815 at 166.276 kb on + strand, within AZOBR_RS26815 at 166.276 kb on + strand, within AZOBR_RS26815 at 166.276 kb on + strand, within AZOBR_RS26815 at 166.277 kb on - strand, within AZOBR_RS26815 at 166.660 kb on + strand, within AZOBR_RS26815 at 166.993 kb on + strand at 166.993 kb on + strand at 166.993 kb on + strand at 166.993 kb on + strand at 166.993 kb on + strand at 166.994 kb on - strand at 166.994 kb on - strand at 166.994 kb on - strand at 167.044 kb on + strand, within AZOBR_RS26820 at 167.044 kb on + strand, within AZOBR_RS26820 at 167.045 kb on - strand, within AZOBR_RS26820 at 167.045 kb on - strand, within AZOBR_RS26820 at 167.045 kb on - strand, within AZOBR_RS26820 at 167.179 kb on + strand, within AZOBR_RS26820 at 167.179 kb on + strand, within AZOBR_RS26820 at 167.179 kb on + strand, within AZOBR_RS26820 at 167.197 kb on + strand, within AZOBR_RS26820 at 167.197 kb on + strand, within AZOBR_RS26820 at 167.290 kb on + strand, within AZOBR_RS26820 at 167.291 kb on - strand, within AZOBR_RS26820 at 167.538 kb on + strand, within AZOBR_RS26820 at 167.538 kb on + strand, within AZOBR_RS26820 at 167.603 kb on - strand, within AZOBR_RS26820 at 167.603 kb on - strand, within AZOBR_RS26820 at 167.603 kb on - strand, within AZOBR_RS26820 at 167.677 kb on + strand, within AZOBR_RS26820 at 167.677 kb on + strand, within AZOBR_RS26820 at 167.678 kb on - strand, within AZOBR_RS26820 at 167.678 kb on - strand, within AZOBR_RS26820 at 168.001 kb on + strand at 168.001 kb on + strand at 168.108 kb on - strand at 168.404 kb on + strand, within AZOBR_RS26825 at 168.590 kb on + strand, within AZOBR_RS26825 at 168.590 kb on + strand, within AZOBR_RS26825 at 168.590 kb on + strand, within AZOBR_RS26825 at 168.590 kb on + strand, within AZOBR_RS26825 at 168.591 kb on - strand, within AZOBR_RS26825 at 168.591 kb on - strand, within AZOBR_RS26825
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 165,947 - -0.0 165,958 + +0.4 165,959 - -0.9 165,959 - -0.6 165,970 + +1.1 165,970 + +1.0 165,970 + +1.0 165,971 - -0.7 166,070 - -0.3 166,070 - -0.3 166,180 + AZOBR_RS26815 0.22 -0.0 166,180 + AZOBR_RS26815 0.22 +0.7 166,228 + AZOBR_RS26815 0.27 -1.2 166,228 + AZOBR_RS26815 0.27 -0.4 166,228 + AZOBR_RS26815 0.27 -0.0 166,228 + AZOBR_RS26815 0.27 -0.2 166,228 + AZOBR_RS26815 0.27 +0.7 166,229 - AZOBR_RS26815 0.27 +1.4 166,229 - AZOBR_RS26815 0.27 -0.0 166,229 - AZOBR_RS26815 0.27 -0.1 166,276 + AZOBR_RS26815 0.32 -2.0 166,276 + AZOBR_RS26815 0.32 -0.4 166,276 + AZOBR_RS26815 0.32 +0.2 166,277 - AZOBR_RS26815 0.33 +1.1 166,660 + AZOBR_RS26815 0.75 +0.1 166,993 + -0.4 166,993 + +0.3 166,993 + -0.8 166,993 + +1.8 166,993 + +0.2 166,994 - -0.2 166,994 - -0.2 166,994 - +1.3 167,044 + AZOBR_RS26820 0.11 -2.0 167,044 + AZOBR_RS26820 0.11 -2.2 167,045 - AZOBR_RS26820 0.11 -0.8 167,045 - AZOBR_RS26820 0.11 -0.7 167,045 - AZOBR_RS26820 0.11 -1.7 167,179 + AZOBR_RS26820 0.22 -0.3 167,179 + AZOBR_RS26820 0.22 -1.7 167,179 + AZOBR_RS26820 0.22 -1.7 167,197 + AZOBR_RS26820 0.24 -0.1 167,197 + AZOBR_RS26820 0.24 -0.5 167,290 + AZOBR_RS26820 0.31 -2.1 167,291 - AZOBR_RS26820 0.31 -3.3 167,538 + AZOBR_RS26820 0.52 -0.2 167,538 + AZOBR_RS26820 0.52 -1.2 167,603 - AZOBR_RS26820 0.57 -0.8 167,603 - AZOBR_RS26820 0.57 -0.3 167,603 - AZOBR_RS26820 0.57 -1.1 167,677 + AZOBR_RS26820 0.64 -0.3 167,677 + AZOBR_RS26820 0.64 -2.5 167,678 - AZOBR_RS26820 0.64 -0.0 167,678 - AZOBR_RS26820 0.64 -1.2 168,001 + +0.1 168,001 + -0.0 168,108 - -0.0 168,404 + AZOBR_RS26825 0.17 -0.7 168,590 + AZOBR_RS26825 0.30 -1.8 168,590 + AZOBR_RS26825 0.30 -0.3 168,590 + AZOBR_RS26825 0.30 -1.0 168,590 + AZOBR_RS26825 0.30 +0.3 168,591 - AZOBR_RS26825 0.30 +0.3 168,591 - AZOBR_RS26825 0.30 +0.6
Or see this region's nucleotide sequence