Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26795 and AZOBR_RS26800 overlap by 4 nucleotides AZOBR_RS26800 and AZOBR_RS26805 are separated by 427 nucleotides AZOBR_RS26805 and AZOBR_RS26810 are separated by 60 nucleotides
AZOBR_RS26795: AZOBR_RS26795 - hypothetical protein, at 161,608 to 162,234
_RS26795
AZOBR_RS26800: AZOBR_RS26800 - hypothetical protein, at 162,231 to 162,803
_RS26800
AZOBR_RS26805: AZOBR_RS26805 - malonyl-CoA synthase, at 163,231 to 164,769
_RS26805
AZOBR_RS26810: AZOBR_RS26810 - quinone oxidoreductase, at 164,830 to 165,810
_RS26810
Position (kb) 163
164
165 Strain fitness (log2 ratio) -2
-1
0
1
2 at 162.340 kb on - strand, within AZOBR_RS26800 at 162.496 kb on - strand, within AZOBR_RS26800 at 162.741 kb on + strand, within AZOBR_RS26800 at 162.742 kb on - strand, within AZOBR_RS26800 at 162.742 kb on - strand, within AZOBR_RS26800 at 162.802 kb on - strand at 162.802 kb on - strand at 163.355 kb on + strand at 163.355 kb on + strand at 163.544 kb on + strand, within AZOBR_RS26805 at 163.545 kb on - strand, within AZOBR_RS26805 at 163.683 kb on - strand, within AZOBR_RS26805 at 163.791 kb on - strand, within AZOBR_RS26805 at 164.003 kb on + strand, within AZOBR_RS26805 at 164.004 kb on - strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.276 kb on + strand, within AZOBR_RS26805 at 164.471 kb on + strand, within AZOBR_RS26805 at 164.471 kb on + strand, within AZOBR_RS26805 at 164.492 kb on + strand, within AZOBR_RS26805 at 164.493 kb on - strand, within AZOBR_RS26805 at 164.493 kb on - strand, within AZOBR_RS26805 at 164.514 kb on - strand, within AZOBR_RS26805 at 164.543 kb on + strand, within AZOBR_RS26805 at 164.543 kb on + strand, within AZOBR_RS26805 at 164.660 kb on + strand at 164.753 kb on + strand at 165.168 kb on - strand, within AZOBR_RS26810 at 165.168 kb on - strand, within AZOBR_RS26810 at 165.168 kb on - strand, within AZOBR_RS26810 at 165.420 kb on - strand, within AZOBR_RS26810 at 165.420 kb on - strand, within AZOBR_RS26810 at 165.674 kb on + strand, within AZOBR_RS26810 at 165.674 kb on + strand, within AZOBR_RS26810 at 165.675 kb on - strand, within AZOBR_RS26810 at 165.675 kb on - strand, within AZOBR_RS26810
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 162,340 - AZOBR_RS26800 0.19 +0.8 162,496 - AZOBR_RS26800 0.46 +0.7 162,741 + AZOBR_RS26800 0.89 +0.7 162,742 - AZOBR_RS26800 0.89 +0.1 162,742 - AZOBR_RS26800 0.89 +0.0 162,802 - +0.2 162,802 - -0.7 163,355 + +1.5 163,355 + -1.4 163,544 + AZOBR_RS26805 0.20 -1.9 163,545 - AZOBR_RS26805 0.20 -0.0 163,683 - AZOBR_RS26805 0.29 -1.0 163,791 - AZOBR_RS26805 0.36 -0.5 164,003 + AZOBR_RS26805 0.50 -0.7 164,004 - AZOBR_RS26805 0.50 -0.7 164,102 + AZOBR_RS26805 0.57 +1.3 164,102 + AZOBR_RS26805 0.57 +0.6 164,102 + AZOBR_RS26805 0.57 +0.0 164,102 + AZOBR_RS26805 0.57 +0.3 164,102 + AZOBR_RS26805 0.57 -1.0 164,103 - AZOBR_RS26805 0.57 +1.8 164,103 - AZOBR_RS26805 0.57 +1.6 164,103 - AZOBR_RS26805 0.57 +1.1 164,103 - AZOBR_RS26805 0.57 -1.4 164,103 - AZOBR_RS26805 0.57 +0.3 164,276 + AZOBR_RS26805 0.68 +0.0 164,471 + AZOBR_RS26805 0.81 +0.3 164,471 + AZOBR_RS26805 0.81 -1.0 164,492 + AZOBR_RS26805 0.82 -1.8 164,493 - AZOBR_RS26805 0.82 +0.6 164,493 - AZOBR_RS26805 0.82 +0.7 164,514 - AZOBR_RS26805 0.83 -0.1 164,543 + AZOBR_RS26805 0.85 -1.5 164,543 + AZOBR_RS26805 0.85 +0.7 164,660 + +1.4 164,753 + +0.8 165,168 - AZOBR_RS26810 0.34 -0.2 165,168 - AZOBR_RS26810 0.34 +0.5 165,168 - AZOBR_RS26810 0.34 +0.4 165,420 - AZOBR_RS26810 0.60 -0.3 165,420 - AZOBR_RS26810 0.60 -0.9 165,674 + AZOBR_RS26810 0.86 -1.0 165,674 + AZOBR_RS26810 0.86 -1.5 165,675 - AZOBR_RS26810 0.86 -0.1 165,675 - AZOBR_RS26810 0.86 +0.0
Or see this region's nucleotide sequence