Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS24800 and AZOBR_RS24805 are separated by 129 nucleotides AZOBR_RS24805 and AZOBR_RS24810 are separated by 622 nucleotides
AZOBR_RS24800: AZOBR_RS24800 - hypothetical protein, at 625,719 to 628,976
_RS24800
AZOBR_RS24805: AZOBR_RS24805 - hypothetical protein, at 629,106 to 630,536
_RS24805
AZOBR_RS24810: AZOBR_RS24810 - hypothetical protein, at 631,159 to 631,833
_RS24810
Position (kb) 629
630
631 Strain fitness (log2 ratio) -2
-1
0
1
2 at 628.397 kb on + strand, within AZOBR_RS24800 at 629.205 kb on - strand at 629.274 kb on + strand, within AZOBR_RS24805 at 629.274 kb on + strand, within AZOBR_RS24805 at 629.274 kb on + strand, within AZOBR_RS24805 at 629.274 kb on + strand, within AZOBR_RS24805 at 629.526 kb on + strand, within AZOBR_RS24805 at 629.526 kb on + strand, within AZOBR_RS24805 at 629.527 kb on - strand, within AZOBR_RS24805 at 629.622 kb on + strand, within AZOBR_RS24805 at 629.622 kb on + strand, within AZOBR_RS24805 at 629.623 kb on - strand, within AZOBR_RS24805 at 629.755 kb on - strand, within AZOBR_RS24805 at 629.943 kb on + strand, within AZOBR_RS24805 at 629.982 kb on + strand, within AZOBR_RS24805 at 629.982 kb on + strand, within AZOBR_RS24805 at 629.982 kb on + strand, within AZOBR_RS24805 at 629.982 kb on + strand, within AZOBR_RS24805 at 629.983 kb on - strand, within AZOBR_RS24805 at 629.983 kb on - strand, within AZOBR_RS24805 at 629.983 kb on - strand at 630.067 kb on - strand, within AZOBR_RS24805 at 630.067 kb on - strand, within AZOBR_RS24805 at 630.330 kb on + strand, within AZOBR_RS24805 at 630.330 kb on + strand, within AZOBR_RS24805 at 630.330 kb on + strand, within AZOBR_RS24805 at 630.330 kb on + strand, within AZOBR_RS24805 at 630.330 kb on + strand, within AZOBR_RS24805 at 630.330 kb on + strand, within AZOBR_RS24805 at 630.330 kb on + strand, within AZOBR_RS24805 at 630.331 kb on - strand, within AZOBR_RS24805 at 630.331 kb on - strand, within AZOBR_RS24805 at 630.331 kb on - strand, within AZOBR_RS24805 at 630.426 kb on + strand at 630.447 kb on + strand at 630.816 kb on + strand at 630.816 kb on + strand at 630.853 kb on - strand at 630.853 kb on - strand at 630.973 kb on + strand at 630.973 kb on + strand at 630.974 kb on - strand at 630.974 kb on - strand at 631.285 kb on + strand, within AZOBR_RS24810 at 631.286 kb on - strand, within AZOBR_RS24810
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 628,397 + AZOBR_RS24800 0.82 +0.7 629,205 - -0.5 629,274 + AZOBR_RS24805 0.12 -0.1 629,274 + AZOBR_RS24805 0.12 +0.4 629,274 + AZOBR_RS24805 0.12 -0.3 629,274 + AZOBR_RS24805 0.12 -0.1 629,526 + AZOBR_RS24805 0.29 +1.5 629,526 + AZOBR_RS24805 0.29 +0.5 629,527 - AZOBR_RS24805 0.29 -1.2 629,622 + AZOBR_RS24805 0.36 -0.6 629,622 + AZOBR_RS24805 0.36 +0.3 629,623 - AZOBR_RS24805 0.36 -0.5 629,755 - AZOBR_RS24805 0.45 -0.3 629,943 + AZOBR_RS24805 0.58 +0.7 629,982 + AZOBR_RS24805 0.61 +2.1 629,982 + AZOBR_RS24805 0.61 +0.5 629,982 + AZOBR_RS24805 0.61 +0.4 629,982 + AZOBR_RS24805 0.61 -1.7 629,983 - AZOBR_RS24805 0.61 -0.6 629,983 - AZOBR_RS24805 0.61 +0.1 629,983 - -0.9 630,067 - AZOBR_RS24805 0.67 +0.3 630,067 - AZOBR_RS24805 0.67 +0.0 630,330 + AZOBR_RS24805 0.86 -0.9 630,330 + AZOBR_RS24805 0.86 +1.6 630,330 + AZOBR_RS24805 0.86 -0.7 630,330 + AZOBR_RS24805 0.86 -0.5 630,330 + AZOBR_RS24805 0.86 +0.5 630,330 + AZOBR_RS24805 0.86 +0.9 630,330 + AZOBR_RS24805 0.86 -0.6 630,331 - AZOBR_RS24805 0.86 +1.6 630,331 - AZOBR_RS24805 0.86 +0.6 630,331 - AZOBR_RS24805 0.86 +0.2 630,426 + -2.6 630,447 + -0.4 630,816 + -0.0 630,816 + +0.0 630,853 - +0.1 630,853 - -1.0 630,973 + -0.7 630,973 + -1.1 630,974 - -0.8 630,974 - +0.5 631,285 + AZOBR_RS24810 0.19 +1.2 631,286 - AZOBR_RS24810 0.19 -1.2
Or see this region's nucleotide sequence