Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS20080 and AZOBR_RS20085 overlap by 4 nucleotides AZOBR_RS20085 and AZOBR_RS20090 are separated by 48 nucleotides AZOBR_RS20090 and AZOBR_RS20095 are separated by 54 nucleotides
AZOBR_RS20080: AZOBR_RS20080 - ATPase, at 1,269,459 to 1,272,224
_RS20080
AZOBR_RS20085: AZOBR_RS20085 - chemotaxis protein CheW, at 1,272,221 to 1,272,721
_RS20085
AZOBR_RS20090: AZOBR_RS20090 - chemotaxis protein CheY, at 1,272,770 to 1,273,135
_RS20090
AZOBR_RS20095: AZOBR_RS20095 - chemotaxis protein CheY, at 1,273,190 to 1,274,374
_RS20095
Position (kb)
1272
1273
1274 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1271.787 kb on + strand, within AZOBR_RS20080 at 1271.788 kb on - strand, within AZOBR_RS20080 at 1271.788 kb on - strand, within AZOBR_RS20080 at 1271.788 kb on - strand, within AZOBR_RS20080 at 1271.788 kb on - strand, within AZOBR_RS20080 at 1271.823 kb on + strand, within AZOBR_RS20080 at 1271.916 kb on + strand, within AZOBR_RS20080 at 1271.917 kb on - strand, within AZOBR_RS20080 at 1272.147 kb on + strand at 1272.147 kb on + strand at 1272.148 kb on - strand at 1272.148 kb on - strand at 1272.148 kb on - strand at 1272.296 kb on + strand, within AZOBR_RS20085 at 1272.296 kb on + strand, within AZOBR_RS20085 at 1272.296 kb on + strand, within AZOBR_RS20085 at 1272.297 kb on - strand, within AZOBR_RS20085 at 1272.297 kb on - strand, within AZOBR_RS20085 at 1272.534 kb on - strand, within AZOBR_RS20085 at 1273.070 kb on + strand, within AZOBR_RS20090 at 1273.070 kb on + strand, within AZOBR_RS20090 at 1273.071 kb on - strand, within AZOBR_RS20090 at 1273.071 kb on - strand, within AZOBR_RS20090 at 1273.568 kb on + strand, within AZOBR_RS20095 at 1273.568 kb on + strand, within AZOBR_RS20095 at 1273.569 kb on - strand, within AZOBR_RS20095 at 1273.569 kb on - strand, within AZOBR_RS20095 at 1273.569 kb on - strand, within AZOBR_RS20095 at 1274.009 kb on + strand, within AZOBR_RS20095 at 1274.009 kb on + strand, within AZOBR_RS20095 at 1274.009 kb on + strand, within AZOBR_RS20095 at 1274.009 kb on + strand, within AZOBR_RS20095 at 1274.010 kb on - strand, within AZOBR_RS20095 at 1274.010 kb on - strand, within AZOBR_RS20095
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 1,271,787 + AZOBR_RS20080 0.84 +1.7 1,271,788 - AZOBR_RS20080 0.84 -1.1 1,271,788 - AZOBR_RS20080 0.84 +0.7 1,271,788 - AZOBR_RS20080 0.84 +0.9 1,271,788 - AZOBR_RS20080 0.84 +1.1 1,271,823 + AZOBR_RS20080 0.85 -0.1 1,271,916 + AZOBR_RS20080 0.89 +0.1 1,271,917 - AZOBR_RS20080 0.89 +0.2 1,272,147 + -3.5 1,272,147 + +1.7 1,272,148 - +0.5 1,272,148 - -0.2 1,272,148 - +1.6 1,272,296 + AZOBR_RS20085 0.15 -0.7 1,272,296 + AZOBR_RS20085 0.15 -1.5 1,272,296 + AZOBR_RS20085 0.15 -0.5 1,272,297 - AZOBR_RS20085 0.15 -0.8 1,272,297 - AZOBR_RS20085 0.15 -0.8 1,272,534 - AZOBR_RS20085 0.62 -1.7 1,273,070 + AZOBR_RS20090 0.82 +0.7 1,273,070 + AZOBR_RS20090 0.82 -1.5 1,273,071 - AZOBR_RS20090 0.82 -1.2 1,273,071 - AZOBR_RS20090 0.82 +0.5 1,273,568 + AZOBR_RS20095 0.32 +0.1 1,273,568 + AZOBR_RS20095 0.32 -0.0 1,273,569 - AZOBR_RS20095 0.32 -1.7 1,273,569 - AZOBR_RS20095 0.32 +0.7 1,273,569 - AZOBR_RS20095 0.32 -1.6 1,274,009 + AZOBR_RS20095 0.69 -0.1 1,274,009 + AZOBR_RS20095 0.69 -0.2 1,274,009 + AZOBR_RS20095 0.69 -0.3 1,274,009 + AZOBR_RS20095 0.69 -0.0 1,274,010 - AZOBR_RS20095 0.69 +1.0 1,274,010 - AZOBR_RS20095 0.69 -2.6
Or see this region's nucleotide sequence