Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS19605 and AZOBR_RS19610 overlap by 14 nucleotides AZOBR_RS19610 and AZOBR_RS19615 are separated by 34 nucleotides AZOBR_RS19615 and AZOBR_RS19620 are separated by 41 nucleotides AZOBR_RS19620 and AZOBR_RS19625 are separated by 57 nucleotides
AZOBR_RS19605: AZOBR_RS19605 - TetR family transcriptional regulator, at 1,170,018 to 1,170,668
_RS19605
AZOBR_RS19610: AZOBR_RS19610 - activator of HSP90 ATPase, at 1,170,655 to 1,171,119
_RS19610
AZOBR_RS19615: AZOBR_RS19615 - glyoxalase/bleomycin resistance protein/dioxygenase, at 1,171,154 to 1,171,588
_RS19615
AZOBR_RS19620: AZOBR_RS19620 - hypothetical protein, at 1,171,630 to 1,171,995
_RS19620
AZOBR_RS19625: AZOBR_RS19625 - hypothetical protein, at 1,172,053 to 1,172,871
_RS19625
Position (kb) 1171
1172 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1171.000 kb on + strand, within AZOBR_RS19610 at 1171.000 kb on + strand, within AZOBR_RS19610 at 1171.001 kb on - strand, within AZOBR_RS19610 at 1171.001 kb on - strand, within AZOBR_RS19610 at 1171.169 kb on + strand at 1171.169 kb on + strand at 1171.169 kb on + strand at 1171.169 kb on + strand at 1171.170 kb on - strand at 1171.170 kb on - strand at 1171.212 kb on - strand, within AZOBR_RS19615 at 1171.242 kb on - strand, within AZOBR_RS19615 at 1171.242 kb on - strand, within AZOBR_RS19615 at 1171.242 kb on - strand, within AZOBR_RS19615 at 1171.370 kb on + strand, within AZOBR_RS19615 at 1171.370 kb on + strand, within AZOBR_RS19615 at 1171.370 kb on + strand, within AZOBR_RS19615 at 1171.370 kb on + strand, within AZOBR_RS19615 at 1171.370 kb on + strand, within AZOBR_RS19615 at 1171.370 kb on + strand, within AZOBR_RS19615 at 1171.370 kb on + strand, within AZOBR_RS19615 at 1171.371 kb on - strand, within AZOBR_RS19615 at 1171.371 kb on - strand, within AZOBR_RS19615 at 1171.371 kb on - strand, within AZOBR_RS19615 at 1171.371 kb on - strand, within AZOBR_RS19615 at 1171.371 kb on - strand, within AZOBR_RS19615 at 1171.636 kb on + strand at 1171.636 kb on + strand at 1171.637 kb on - strand at 1171.637 kb on - strand at 1172.309 kb on + strand, within AZOBR_RS19625 at 1172.310 kb on - strand, within AZOBR_RS19625 at 1172.310 kb on - strand, within AZOBR_RS19625 at 1172.312 kb on + strand, within AZOBR_RS19625 at 1172.312 kb on + strand, within AZOBR_RS19625 at 1172.312 kb on + strand, within AZOBR_RS19625 at 1172.312 kb on + strand, within AZOBR_RS19625 at 1172.313 kb on - strand, within AZOBR_RS19625 at 1172.313 kb on - strand, within AZOBR_RS19625 at 1172.313 kb on - strand, within AZOBR_RS19625 at 1172.313 kb on - strand, within AZOBR_RS19625 at 1172.313 kb on - strand, within AZOBR_RS19625 at 1172.369 kb on + strand, within AZOBR_RS19625 at 1172.369 kb on + strand, within AZOBR_RS19625 at 1172.372 kb on + strand, within AZOBR_RS19625 at 1172.454 kb on - strand, within AZOBR_RS19625 at 1172.454 kb on - strand, within AZOBR_RS19625 at 1172.579 kb on + strand, within AZOBR_RS19625 at 1172.580 kb on - strand, within AZOBR_RS19625 at 1172.660 kb on + strand, within AZOBR_RS19625 at 1172.661 kb on - strand, within AZOBR_RS19625 at 1172.920 kb on + strand at 1172.920 kb on + strand at 1172.921 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 1,171,000 + AZOBR_RS19610 0.74 +0.4 1,171,000 + AZOBR_RS19610 0.74 +0.1 1,171,001 - AZOBR_RS19610 0.74 -1.7 1,171,001 - AZOBR_RS19610 0.74 -1.3 1,171,169 + +0.3 1,171,169 + -0.1 1,171,169 + +0.9 1,171,169 + +0.5 1,171,170 - +0.3 1,171,170 - -0.7 1,171,212 - AZOBR_RS19615 0.13 +1.0 1,171,242 - AZOBR_RS19615 0.20 +0.3 1,171,242 - AZOBR_RS19615 0.20 +0.5 1,171,242 - AZOBR_RS19615 0.20 +0.2 1,171,370 + AZOBR_RS19615 0.50 -1.1 1,171,370 + AZOBR_RS19615 0.50 -3.1 1,171,370 + AZOBR_RS19615 0.50 -0.6 1,171,370 + AZOBR_RS19615 0.50 -0.3 1,171,370 + AZOBR_RS19615 0.50 -1.1 1,171,370 + AZOBR_RS19615 0.50 +0.9 1,171,370 + AZOBR_RS19615 0.50 +0.4 1,171,371 - AZOBR_RS19615 0.50 +0.6 1,171,371 - AZOBR_RS19615 0.50 -2.4 1,171,371 - AZOBR_RS19615 0.50 -1.1 1,171,371 - AZOBR_RS19615 0.50 -0.4 1,171,371 - AZOBR_RS19615 0.50 -2.1 1,171,636 + -0.1 1,171,636 + +0.6 1,171,637 - +0.8 1,171,637 - -0.6 1,172,309 + AZOBR_RS19625 0.31 +0.6 1,172,310 - AZOBR_RS19625 0.31 +0.6 1,172,310 - AZOBR_RS19625 0.31 +0.5 1,172,312 + AZOBR_RS19625 0.32 +0.1 1,172,312 + AZOBR_RS19625 0.32 +1.0 1,172,312 + AZOBR_RS19625 0.32 +1.0 1,172,312 + AZOBR_RS19625 0.32 +1.3 1,172,313 - AZOBR_RS19625 0.32 -0.8 1,172,313 - AZOBR_RS19625 0.32 +0.5 1,172,313 - AZOBR_RS19625 0.32 -1.1 1,172,313 - AZOBR_RS19625 0.32 +0.6 1,172,313 - AZOBR_RS19625 0.32 -0.8 1,172,369 + AZOBR_RS19625 0.39 +1.5 1,172,369 + AZOBR_RS19625 0.39 +0.5 1,172,372 + AZOBR_RS19625 0.39 -2.7 1,172,454 - AZOBR_RS19625 0.49 +2.4 1,172,454 - AZOBR_RS19625 0.49 -0.1 1,172,579 + AZOBR_RS19625 0.64 +0.8 1,172,580 - AZOBR_RS19625 0.64 -0.3 1,172,660 + AZOBR_RS19625 0.74 -1.8 1,172,661 - AZOBR_RS19625 0.74 +0.3 1,172,920 + -0.3 1,172,920 + +0.0 1,172,921 - -0.6
Or see this region's nucleotide sequence