Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18195 and AZOBR_RS18200 are separated by 100 nucleotides AZOBR_RS18200 and AZOBR_RS18205 are separated by 230 nucleotides
AZOBR_RS18195: AZOBR_RS18195 - hypothetical protein, at 840,290 to 843,593
_RS18195
AZOBR_RS18200: AZOBR_RS18200 - hypothetical protein, at 843,694 to 846,412
_RS18200
AZOBR_RS18205: AZOBR_RS18205 - outer membrane efflux protein, at 846,643 to 847,959
_RS18205
Position (kb) 843
844
845
846
847 Strain fitness (log2 ratio) -2
-1
0
1
2 at 842.879 kb on + strand, within AZOBR_RS18195 at 842.879 kb on + strand, within AZOBR_RS18195 at 842.879 kb on + strand, within AZOBR_RS18195 at 842.879 kb on + strand, within AZOBR_RS18195 at 842.879 kb on + strand, within AZOBR_RS18195 at 842.879 kb on + strand, within AZOBR_RS18195 at 842.880 kb on - strand, within AZOBR_RS18195 at 843.342 kb on - strand at 843.342 kb on - strand at 844.058 kb on + strand, within AZOBR_RS18200 at 844.059 kb on - strand, within AZOBR_RS18200 at 844.581 kb on - strand, within AZOBR_RS18200 at 844.595 kb on + strand, within AZOBR_RS18200 at 844.595 kb on + strand, within AZOBR_RS18200 at 844.596 kb on - strand, within AZOBR_RS18200 at 844.898 kb on + strand, within AZOBR_RS18200 at 844.898 kb on + strand, within AZOBR_RS18200 at 844.898 kb on + strand, within AZOBR_RS18200 at 844.898 kb on + strand, within AZOBR_RS18200 at 844.898 kb on + strand, within AZOBR_RS18200 at 845.004 kb on - strand, within AZOBR_RS18200 at 845.213 kb on + strand at 845.214 kb on - strand, within AZOBR_RS18200 at 845.227 kb on + strand, within AZOBR_RS18200 at 845.240 kb on - strand, within AZOBR_RS18200 at 846.464 kb on + strand at 846.489 kb on - strand at 846.505 kb on + strand at 846.520 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 842,879 + AZOBR_RS18195 0.78 -0.8 842,879 + AZOBR_RS18195 0.78 +0.2 842,879 + AZOBR_RS18195 0.78 +1.1 842,879 + AZOBR_RS18195 0.78 +0.2 842,879 + AZOBR_RS18195 0.78 -0.3 842,879 + AZOBR_RS18195 0.78 +0.5 842,880 - AZOBR_RS18195 0.78 -1.5 843,342 - +2.0 843,342 - -0.9 844,058 + AZOBR_RS18200 0.13 -2.3 844,059 - AZOBR_RS18200 0.13 -0.5 844,581 - AZOBR_RS18200 0.33 +0.7 844,595 + AZOBR_RS18200 0.33 -2.3 844,595 + AZOBR_RS18200 0.33 -0.1 844,596 - AZOBR_RS18200 0.33 -0.3 844,898 + AZOBR_RS18200 0.44 -0.4 844,898 + AZOBR_RS18200 0.44 +0.2 844,898 + AZOBR_RS18200 0.44 +0.2 844,898 + AZOBR_RS18200 0.44 +0.7 844,898 + AZOBR_RS18200 0.44 +0.9 845,004 - AZOBR_RS18200 0.48 -0.6 845,213 + +0.5 845,214 - AZOBR_RS18200 0.56 -0.1 845,227 + AZOBR_RS18200 0.56 -0.5 845,240 - AZOBR_RS18200 0.57 +0.3 846,464 + -0.2 846,489 - +1.3 846,505 + +0.7 846,520 - +0.3
Or see this region's nucleotide sequence