Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16505 and AZOBR_RS16510 are separated by 135 nucleotides AZOBR_RS16510 and AZOBR_RS16515 are separated by 7 nucleotides
AZOBR_RS16505: AZOBR_RS16505 - hypothetical protein, at 453,661 to 454,647
_RS16505
AZOBR_RS16510: AZOBR_RS16510 - S-formylglutathione hydrolase, at 454,783 to 455,646
_RS16510
AZOBR_RS16515: AZOBR_RS16515 - S-(hydroxymethyl)glutathione dehydrogenase, at 455,654 to 456,772
_RS16515
Position (kb) 454
455
456 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 453.803 kb on + strand, within AZOBR_RS16505 at 453.824 kb on + strand, within AZOBR_RS16505 at 453.824 kb on + strand, within AZOBR_RS16505 at 453.825 kb on - strand, within AZOBR_RS16505 at 453.905 kb on + strand, within AZOBR_RS16505 at 453.905 kb on + strand, within AZOBR_RS16505 at 453.906 kb on - strand, within AZOBR_RS16505 at 453.906 kb on - strand, within AZOBR_RS16505 at 453.906 kb on - strand, within AZOBR_RS16505 at 454.055 kb on + strand, within AZOBR_RS16505 at 454.055 kb on + strand, within AZOBR_RS16505 at 454.056 kb on - strand, within AZOBR_RS16505 at 454.109 kb on + strand, within AZOBR_RS16505 at 454.109 kb on + strand, within AZOBR_RS16505 at 454.514 kb on + strand, within AZOBR_RS16505 at 454.514 kb on + strand, within AZOBR_RS16505 at 454.515 kb on - strand, within AZOBR_RS16505 at 454.515 kb on - strand, within AZOBR_RS16505 at 454.735 kb on + strand at 454.736 kb on - strand at 454.736 kb on - strand at 454.764 kb on + strand at 454.765 kb on - strand at 454.850 kb on + strand at 454.850 kb on + strand at 454.851 kb on - strand at 455.043 kb on - strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.258 kb on + strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.259 kb on - strand, within AZOBR_RS16510 at 455.483 kb on + strand, within AZOBR_RS16510 at 455.537 kb on + strand, within AZOBR_RS16510 at 455.537 kb on + strand, within AZOBR_RS16510 at 455.538 kb on - strand, within AZOBR_RS16510 at 455.538 kb on - strand, within AZOBR_RS16510 at 455.664 kb on + strand at 455.665 kb on - strand at 455.793 kb on + strand, within AZOBR_RS16515 at 455.794 kb on - strand, within AZOBR_RS16515 at 455.995 kb on - strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.048 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.366 kb on + strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.367 kb on - strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.636 kb on + strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515 at 456.637 kb on - strand, within AZOBR_RS16515
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 453,803 + AZOBR_RS16505 0.14 -0.1 453,824 + AZOBR_RS16505 0.17 -0.8 453,824 + AZOBR_RS16505 0.17 +0.5 453,825 - AZOBR_RS16505 0.17 -0.1 453,905 + AZOBR_RS16505 0.25 +1.0 453,905 + AZOBR_RS16505 0.25 +0.1 453,906 - AZOBR_RS16505 0.25 +0.2 453,906 - AZOBR_RS16505 0.25 -0.3 453,906 - AZOBR_RS16505 0.25 +0.0 454,055 + AZOBR_RS16505 0.40 -0.3 454,055 + AZOBR_RS16505 0.40 +0.0 454,056 - AZOBR_RS16505 0.40 +1.6 454,109 + AZOBR_RS16505 0.45 -1.0 454,109 + AZOBR_RS16505 0.45 -0.2 454,514 + AZOBR_RS16505 0.86 -0.7 454,514 + AZOBR_RS16505 0.86 +0.2 454,515 - AZOBR_RS16505 0.87 +0.9 454,515 - AZOBR_RS16505 0.87 -0.0 454,735 + +0.4 454,736 - -0.8 454,736 - -0.1 454,764 + +0.4 454,765 - -0.2 454,850 + -0.1 454,850 + +0.5 454,851 - +0.3 455,043 - AZOBR_RS16510 0.30 -1.5 455,258 + AZOBR_RS16510 0.55 -2.8 455,258 + AZOBR_RS16510 0.55 -1.1 455,258 + AZOBR_RS16510 0.55 -0.5 455,258 + AZOBR_RS16510 0.55 +0.3 455,258 + AZOBR_RS16510 0.55 +1.9 455,259 - AZOBR_RS16510 0.55 -0.0 455,259 - AZOBR_RS16510 0.55 -0.1 455,259 - AZOBR_RS16510 0.55 -1.0 455,483 + AZOBR_RS16510 0.81 -0.5 455,537 + AZOBR_RS16510 0.87 +1.5 455,537 + AZOBR_RS16510 0.87 +0.4 455,538 - AZOBR_RS16510 0.87 -0.1 455,538 - AZOBR_RS16510 0.87 +0.9 455,664 + +0.0 455,665 - +0.2 455,793 + AZOBR_RS16515 0.12 -0.6 455,794 - AZOBR_RS16515 0.13 -2.9 455,995 - AZOBR_RS16515 0.30 -2.3 456,048 + AZOBR_RS16515 0.35 +0.3 456,048 + AZOBR_RS16515 0.35 +1.0 456,366 + AZOBR_RS16515 0.64 +0.1 456,366 + AZOBR_RS16515 0.64 -1.0 456,366 + AZOBR_RS16515 0.64 +0.9 456,366 + AZOBR_RS16515 0.64 -0.1 456,366 + AZOBR_RS16515 0.64 +0.6 456,367 - AZOBR_RS16515 0.64 +0.4 456,367 - AZOBR_RS16515 0.64 +0.2 456,367 - AZOBR_RS16515 0.64 +1.4 456,367 - AZOBR_RS16515 0.64 -0.4 456,367 - AZOBR_RS16515 0.64 -0.3 456,367 - AZOBR_RS16515 0.64 -1.5 456,636 + AZOBR_RS16515 0.88 -0.2 456,636 + AZOBR_RS16515 0.88 -3.0 456,637 - AZOBR_RS16515 0.88 +0.1 456,637 - AZOBR_RS16515 0.88 +0.2 456,637 - AZOBR_RS16515 0.88 +1.2 456,637 - AZOBR_RS16515 0.88 -0.3
Or see this region's nucleotide sequence