Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14865 and AZOBR_RS14870 are separated by 85 nucleotides AZOBR_RS14870 and AZOBR_RS14875 are separated by 129 nucleotides AZOBR_RS14875 and AZOBR_RS14880 are separated by 100 nucleotides AZOBR_RS14880 and AZOBR_RS14885 are separated by 235 nucleotides
AZOBR_RS14865: AZOBR_RS14865 - aminopeptidase N, at 107,728 to 110,385
_RS14865
AZOBR_RS14870: AZOBR_RS14870 - cytochrome C transmembrane protein, at 110,471 to 110,851
_RS14870
AZOBR_RS14875: AZOBR_RS14875 - carbon monoxide dehydrogenase subunit G, at 110,981 to 111,643
_RS14875
AZOBR_RS14880: AZOBR_RS14880 - hypothetical protein, at 111,744 to 112,205
_RS14880
AZOBR_RS14885: AZOBR_RS14885 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, at 112,441 to 112,947
_RS14885
Position (kb)
110
111
112 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 110.111 kb on - strand, within AZOBR_RS14865 at 110.111 kb on - strand, within AZOBR_RS14865 at 110.580 kb on + strand, within AZOBR_RS14870 at 110.580 kb on + strand, within AZOBR_RS14870 at 110.581 kb on - strand, within AZOBR_RS14870 at 110.840 kb on - strand at 110.840 kb on - strand at 110.840 kb on - strand at 110.914 kb on + strand at 110.914 kb on + strand at 110.914 kb on + strand at 110.914 kb on + strand at 110.915 kb on - strand at 110.915 kb on - strand at 110.915 kb on - strand at 110.929 kb on + strand at 110.930 kb on - strand at 111.045 kb on + strand at 111.045 kb on + strand at 111.046 kb on - strand at 111.046 kb on - strand at 111.423 kb on + strand, within AZOBR_RS14875 at 111.423 kb on + strand, within AZOBR_RS14875 at 111.424 kb on - strand, within AZOBR_RS14875 at 111.424 kb on - strand, within AZOBR_RS14875 at 111.680 kb on + strand at 112.006 kb on + strand, within AZOBR_RS14880 at 112.007 kb on - strand, within AZOBR_RS14880 at 112.007 kb on - strand, within AZOBR_RS14880 at 112.007 kb on - strand, within AZOBR_RS14880 at 112.012 kb on + strand, within AZOBR_RS14880 at 112.012 kb on + strand, within AZOBR_RS14880 at 112.012 kb on + strand, within AZOBR_RS14880 at 112.012 kb on + strand, within AZOBR_RS14880 at 112.012 kb on + strand, within AZOBR_RS14880 at 112.012 kb on + strand, within AZOBR_RS14880 at 112.013 kb on - strand, within AZOBR_RS14880 at 112.013 kb on - strand, within AZOBR_RS14880 at 112.015 kb on + strand, within AZOBR_RS14880 at 112.016 kb on - strand, within AZOBR_RS14880 at 112.287 kb on + strand at 112.288 kb on - strand at 112.288 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 110,111 - AZOBR_RS14865 0.90 -0.6 110,111 - AZOBR_RS14865 0.90 -0.3 110,580 + AZOBR_RS14870 0.29 +0.9 110,580 + AZOBR_RS14870 0.29 +1.3 110,581 - AZOBR_RS14870 0.29 +3.5 110,840 - +0.3 110,840 - +0.3 110,840 - +0.2 110,914 + -1.3 110,914 + +0.7 110,914 + +0.2 110,914 + -0.2 110,915 - +0.4 110,915 - -0.0 110,915 - -0.2 110,929 + +0.4 110,930 - +1.5 111,045 + +0.6 111,045 + +0.3 111,046 - -0.2 111,046 - +0.2 111,423 + AZOBR_RS14875 0.67 -0.2 111,423 + AZOBR_RS14875 0.67 -0.0 111,424 - AZOBR_RS14875 0.67 +0.8 111,424 - AZOBR_RS14875 0.67 -0.1 111,680 + -3.1 112,006 + AZOBR_RS14880 0.57 +1.6 112,007 - AZOBR_RS14880 0.57 +0.1 112,007 - AZOBR_RS14880 0.57 -1.1 112,007 - AZOBR_RS14880 0.57 +0.7 112,012 + AZOBR_RS14880 0.58 -0.5 112,012 + AZOBR_RS14880 0.58 +0.4 112,012 + AZOBR_RS14880 0.58 -2.5 112,012 + AZOBR_RS14880 0.58 -0.2 112,012 + AZOBR_RS14880 0.58 +0.6 112,012 + AZOBR_RS14880 0.58 +1.0 112,013 - AZOBR_RS14880 0.58 -0.7 112,013 - AZOBR_RS14880 0.58 -2.0 112,015 + AZOBR_RS14880 0.59 +0.2 112,016 - AZOBR_RS14880 0.59 +0.1 112,287 + +1.4 112,288 - +0.1 112,288 - -0.0
Or see this region's nucleotide sequence