Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14320 and AZOBR_RS14325 are separated by 10 nucleotides AZOBR_RS14325 and AZOBR_RS14330 are separated by 84 nucleotides
AZOBR_RS14320: AZOBR_RS14320 - histidine kinase, at 3,011,714 to 3,014,050
_RS14320
AZOBR_RS14325: AZOBR_RS14325 - histidine kinase, at 3,014,061 to 3,017,036
_RS14325
AZOBR_RS14330: AZOBR_RS14330 - hypothetical protein, at 3,017,121 to 3,018,461
_RS14330
Position (kb)
3014
3015
3016
3017
3018 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 3013.197 kb on - strand, within AZOBR_RS14320 at 3013.310 kb on + strand, within AZOBR_RS14320 at 3013.311 kb on - strand, within AZOBR_RS14320 at 3013.400 kb on + strand, within AZOBR_RS14320 at 3013.400 kb on + strand, within AZOBR_RS14320 at 3013.401 kb on - strand, within AZOBR_RS14320 at 3013.401 kb on - strand, within AZOBR_RS14320 at 3013.401 kb on - strand, within AZOBR_RS14320 at 3013.535 kb on + strand, within AZOBR_RS14320 at 3013.535 kb on + strand, within AZOBR_RS14320 at 3013.535 kb on + strand, within AZOBR_RS14320 at 3013.536 kb on - strand, within AZOBR_RS14320 at 3013.536 kb on - strand, within AZOBR_RS14320 at 3014.481 kb on + strand, within AZOBR_RS14325 at 3014.482 kb on - strand, within AZOBR_RS14325 at 3014.547 kb on + strand, within AZOBR_RS14325 at 3014.661 kb on + strand, within AZOBR_RS14325 at 3014.661 kb on + strand, within AZOBR_RS14325 at 3014.662 kb on - strand, within AZOBR_RS14325 at 3014.931 kb on + strand, within AZOBR_RS14325 at 3014.931 kb on + strand, within AZOBR_RS14325 at 3014.931 kb on + strand, within AZOBR_RS14325 at 3014.932 kb on - strand, within AZOBR_RS14325 at 3014.932 kb on - strand, within AZOBR_RS14325 at 3015.309 kb on + strand, within AZOBR_RS14325 at 3015.309 kb on + strand, within AZOBR_RS14325 at 3015.309 kb on + strand, within AZOBR_RS14325 at 3015.310 kb on - strand, within AZOBR_RS14325 at 3015.310 kb on - strand, within AZOBR_RS14325 at 3015.310 kb on - strand, within AZOBR_RS14325 at 3015.828 kb on + strand, within AZOBR_RS14325 at 3015.829 kb on - strand, within AZOBR_RS14325 at 3015.829 kb on - strand, within AZOBR_RS14325 at 3016.374 kb on + strand, within AZOBR_RS14325 at 3016.375 kb on - strand, within AZOBR_RS14325 at 3016.521 kb on + strand, within AZOBR_RS14325 at 3017.392 kb on - strand, within AZOBR_RS14330 at 3017.437 kb on - strand, within AZOBR_RS14330 at 3017.437 kb on - strand, within AZOBR_RS14330 at 3017.500 kb on - strand, within AZOBR_RS14330 at 3017.694 kb on + strand, within AZOBR_RS14330 at 3017.694 kb on + strand, within AZOBR_RS14330 at 3017.694 kb on + strand, within AZOBR_RS14330 at 3017.695 kb on - strand, within AZOBR_RS14330 at 3017.733 kb on + strand, within AZOBR_RS14330 at 3017.734 kb on - strand, within AZOBR_RS14330 at 3017.770 kb on - strand, within AZOBR_RS14330 at 3017.913 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.024 kb on + strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.025 kb on - strand, within AZOBR_RS14330 at 3018.033 kb on + strand, within AZOBR_RS14330 at 3018.033 kb on + strand, within AZOBR_RS14330 at 3018.034 kb on - strand, within AZOBR_RS14330 at 3018.034 kb on - strand, within AZOBR_RS14330
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 3,013,197 - AZOBR_RS14320 0.63 +2.0 3,013,310 + AZOBR_RS14320 0.68 +0.7 3,013,311 - AZOBR_RS14320 0.68 -3.6 3,013,400 + AZOBR_RS14320 0.72 +0.7 3,013,400 + AZOBR_RS14320 0.72 -1.8 3,013,401 - AZOBR_RS14320 0.72 +0.9 3,013,401 - AZOBR_RS14320 0.72 +0.1 3,013,401 - AZOBR_RS14320 0.72 +1.8 3,013,535 + AZOBR_RS14320 0.78 -1.6 3,013,535 + AZOBR_RS14320 0.78 -0.1 3,013,535 + AZOBR_RS14320 0.78 -0.0 3,013,536 - AZOBR_RS14320 0.78 +0.1 3,013,536 - AZOBR_RS14320 0.78 +2.0 3,014,481 + AZOBR_RS14325 0.14 +0.2 3,014,482 - AZOBR_RS14325 0.14 +1.0 3,014,547 + AZOBR_RS14325 0.16 -2.1 3,014,661 + AZOBR_RS14325 0.20 +1.2 3,014,661 + AZOBR_RS14325 0.20 +0.5 3,014,662 - AZOBR_RS14325 0.20 +0.2 3,014,931 + AZOBR_RS14325 0.29 -0.0 3,014,931 + AZOBR_RS14325 0.29 +0.0 3,014,931 + AZOBR_RS14325 0.29 +0.1 3,014,932 - AZOBR_RS14325 0.29 +0.5 3,014,932 - AZOBR_RS14325 0.29 +1.7 3,015,309 + AZOBR_RS14325 0.42 -0.1 3,015,309 + AZOBR_RS14325 0.42 +0.2 3,015,309 + AZOBR_RS14325 0.42 +0.8 3,015,310 - AZOBR_RS14325 0.42 +0.9 3,015,310 - AZOBR_RS14325 0.42 -0.3 3,015,310 - AZOBR_RS14325 0.42 -0.0 3,015,828 + AZOBR_RS14325 0.59 +1.0 3,015,829 - AZOBR_RS14325 0.59 +0.2 3,015,829 - AZOBR_RS14325 0.59 +0.1 3,016,374 + AZOBR_RS14325 0.78 -0.4 3,016,375 - AZOBR_RS14325 0.78 +1.2 3,016,521 + AZOBR_RS14325 0.83 +0.8 3,017,392 - AZOBR_RS14330 0.20 +0.0 3,017,437 - AZOBR_RS14330 0.24 +0.9 3,017,437 - AZOBR_RS14330 0.24 -1.0 3,017,500 - AZOBR_RS14330 0.28 -0.7 3,017,694 + AZOBR_RS14330 0.43 +0.3 3,017,694 + AZOBR_RS14330 0.43 +1.4 3,017,694 + AZOBR_RS14330 0.43 -0.4 3,017,695 - AZOBR_RS14330 0.43 +0.2 3,017,733 + AZOBR_RS14330 0.46 +0.2 3,017,734 - AZOBR_RS14330 0.46 -0.2 3,017,770 - AZOBR_RS14330 0.48 +1.2 3,017,913 + AZOBR_RS14330 0.59 -0.7 3,018,024 + AZOBR_RS14330 0.67 -2.0 3,018,024 + AZOBR_RS14330 0.67 +0.3 3,018,024 + AZOBR_RS14330 0.67 +0.3 3,018,024 + AZOBR_RS14330 0.67 -0.6 3,018,024 + AZOBR_RS14330 0.67 +0.4 3,018,024 + AZOBR_RS14330 0.67 -0.5 3,018,024 + AZOBR_RS14330 0.67 +0.8 3,018,024 + AZOBR_RS14330 0.67 -0.9 3,018,024 + AZOBR_RS14330 0.67 +0.3 3,018,024 + AZOBR_RS14330 0.67 +0.5 3,018,024 + AZOBR_RS14330 0.67 +0.3 3,018,024 + AZOBR_RS14330 0.67 +0.6 3,018,024 + AZOBR_RS14330 0.67 -0.6 3,018,024 + AZOBR_RS14330 0.67 -0.2 3,018,024 + AZOBR_RS14330 0.67 -0.6 3,018,024 + AZOBR_RS14330 0.67 -0.6 3,018,024 + AZOBR_RS14330 0.67 -0.5 3,018,024 + AZOBR_RS14330 0.67 +0.3 3,018,024 + AZOBR_RS14330 0.67 +0.4 3,018,024 + AZOBR_RS14330 0.67 -0.3 3,018,025 - AZOBR_RS14330 0.67 +0.5 3,018,025 - AZOBR_RS14330 0.67 -1.1 3,018,025 - AZOBR_RS14330 0.67 +1.2 3,018,025 - AZOBR_RS14330 0.67 -0.0 3,018,025 - AZOBR_RS14330 0.67 -1.8 3,018,025 - AZOBR_RS14330 0.67 +0.8 3,018,025 - AZOBR_RS14330 0.67 +0.5 3,018,025 - AZOBR_RS14330 0.67 +0.2 3,018,025 - AZOBR_RS14330 0.67 -0.5 3,018,025 - AZOBR_RS14330 0.67 +0.0 3,018,025 - AZOBR_RS14330 0.67 +0.0 3,018,025 - AZOBR_RS14330 0.67 -0.4 3,018,025 - AZOBR_RS14330 0.67 -0.7 3,018,025 - AZOBR_RS14330 0.67 -1.5 3,018,025 - AZOBR_RS14330 0.67 +0.5 3,018,025 - AZOBR_RS14330 0.67 +0.3 3,018,025 - AZOBR_RS14330 0.67 -0.2 3,018,025 - AZOBR_RS14330 0.67 +1.5 3,018,025 - AZOBR_RS14330 0.67 +0.2 3,018,025 - AZOBR_RS14330 0.67 +0.6 3,018,025 - AZOBR_RS14330 0.67 +1.1 3,018,033 + AZOBR_RS14330 0.68 -0.2 3,018,033 + AZOBR_RS14330 0.68 -0.2 3,018,034 - AZOBR_RS14330 0.68 -0.8 3,018,034 - AZOBR_RS14330 0.68 +3.8
Or see this region's nucleotide sequence