Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS14175 and AZOBR_RS14180 are separated by 93 nucleotides AZOBR_RS14180 and AZOBR_RS14185 are separated by 302 nucleotides AZOBR_RS14185 and AZOBR_RS14190 are separated by 34 nucleotides
AZOBR_RS14175: AZOBR_RS14175 - AMP nucleosidase, at 2,981,755 to 2,983,284
_RS14175
AZOBR_RS14180: AZOBR_RS14180 - hypothetical protein, at 2,983,378 to 2,984,451
_RS14180
AZOBR_RS14185: AZOBR_RS14185 - septation protein A, at 2,984,754 to 2,985,329
_RS14185
AZOBR_RS14190: AZOBR_RS14190 - chitin deacetylase, at 2,985,364 to 2,986,302
_RS14190
Position (kb)
2983
2984
2985 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2982.404 kb on - strand, within AZOBR_RS14175 at 2982.412 kb on + strand, within AZOBR_RS14175 at 2982.412 kb on + strand, within AZOBR_RS14175 at 2982.412 kb on + strand, within AZOBR_RS14175 at 2982.413 kb on - strand, within AZOBR_RS14175 at 2982.413 kb on - strand, within AZOBR_RS14175 at 2982.494 kb on - strand, within AZOBR_RS14175 at 2982.775 kb on + strand, within AZOBR_RS14175 at 2982.775 kb on + strand, within AZOBR_RS14175 at 2982.776 kb on - strand, within AZOBR_RS14175 at 2982.794 kb on - strand, within AZOBR_RS14175 at 2983.339 kb on + strand at 2983.339 kb on + strand at 2983.340 kb on - strand at 2983.344 kb on + strand at 2983.345 kb on - strand at 2983.345 kb on - strand at 2983.345 kb on - strand at 2983.345 kb on - strand at 2983.377 kb on + strand at 2983.377 kb on + strand at 2983.377 kb on + strand at 2983.378 kb on - strand at 2983.378 kb on - strand at 2983.579 kb on + strand, within AZOBR_RS14180 at 2983.582 kb on + strand, within AZOBR_RS14180 at 2983.583 kb on - strand, within AZOBR_RS14180 at 2983.603 kb on + strand, within AZOBR_RS14180 at 2983.603 kb on + strand, within AZOBR_RS14180 at 2983.603 kb on + strand, within AZOBR_RS14180 at 2983.604 kb on - strand, within AZOBR_RS14180 at 2983.604 kb on - strand, within AZOBR_RS14180 at 2983.606 kb on + strand, within AZOBR_RS14180 at 2983.606 kb on + strand, within AZOBR_RS14180 at 2983.607 kb on - strand, within AZOBR_RS14180 at 2983.607 kb on - strand, within AZOBR_RS14180 at 2983.607 kb on - strand, within AZOBR_RS14180 at 2983.607 kb on - strand, within AZOBR_RS14180 at 2983.607 kb on - strand, within AZOBR_RS14180 at 2983.631 kb on - strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.720 kb on + strand, within AZOBR_RS14180 at 2983.721 kb on - strand, within AZOBR_RS14180 at 2983.721 kb on - strand, within AZOBR_RS14180 at 2983.721 kb on - strand, within AZOBR_RS14180 at 2983.721 kb on - strand, within AZOBR_RS14180 at 2983.721 kb on - strand, within AZOBR_RS14180 at 2983.940 kb on - strand, within AZOBR_RS14180 at 2983.975 kb on + strand, within AZOBR_RS14180 at 2983.975 kb on + strand, within AZOBR_RS14180 at 2983.975 kb on + strand, within AZOBR_RS14180 at 2983.975 kb on + strand, within AZOBR_RS14180 at 2983.976 kb on - strand, within AZOBR_RS14180 at 2983.976 kb on - strand, within AZOBR_RS14180 at 2983.976 kb on - strand, within AZOBR_RS14180 at 2984.212 kb on + strand, within AZOBR_RS14180 at 2984.213 kb on - strand, within AZOBR_RS14180 at 2984.219 kb on - strand, within AZOBR_RS14180 at 2984.219 kb on - strand, within AZOBR_RS14180 at 2984.366 kb on - strand at 2984.366 kb on - strand at 2984.411 kb on - strand at 2984.419 kb on + strand at 2984.420 kb on - strand at 2984.440 kb on + strand at 2984.441 kb on - strand at 2984.504 kb on + strand at 2984.505 kb on - strand at 2984.505 kb on - strand at 2984.686 kb on + strand at 2984.742 kb on + strand at 2984.743 kb on - strand at 2984.763 kb on + strand at 2984.763 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 2,982,404 - AZOBR_RS14175 0.42 +1.1 2,982,412 + AZOBR_RS14175 0.43 -0.3 2,982,412 + AZOBR_RS14175 0.43 -0.4 2,982,412 + AZOBR_RS14175 0.43 +0.4 2,982,413 - AZOBR_RS14175 0.43 +0.3 2,982,413 - AZOBR_RS14175 0.43 -0.2 2,982,494 - AZOBR_RS14175 0.48 +1.6 2,982,775 + AZOBR_RS14175 0.67 -1.1 2,982,775 + AZOBR_RS14175 0.67 -1.6 2,982,776 - AZOBR_RS14175 0.67 -1.0 2,982,794 - AZOBR_RS14175 0.68 +1.7 2,983,339 + -0.5 2,983,339 + +0.7 2,983,340 - -0.2 2,983,344 + -2.5 2,983,345 - +0.5 2,983,345 - +1.1 2,983,345 - +0.7 2,983,345 - -0.4 2,983,377 + -0.6 2,983,377 + +0.6 2,983,377 + -0.7 2,983,378 - -1.1 2,983,378 - -1.6 2,983,579 + AZOBR_RS14180 0.19 +0.5 2,983,582 + AZOBR_RS14180 0.19 -2.9 2,983,583 - AZOBR_RS14180 0.19 -0.9 2,983,603 + AZOBR_RS14180 0.21 +0.5 2,983,603 + AZOBR_RS14180 0.21 -0.5 2,983,603 + AZOBR_RS14180 0.21 +0.6 2,983,604 - AZOBR_RS14180 0.21 -1.2 2,983,604 - AZOBR_RS14180 0.21 +0.9 2,983,606 + AZOBR_RS14180 0.21 +0.4 2,983,606 + AZOBR_RS14180 0.21 +0.8 2,983,607 - AZOBR_RS14180 0.21 +0.2 2,983,607 - AZOBR_RS14180 0.21 -0.4 2,983,607 - AZOBR_RS14180 0.21 +0.7 2,983,607 - AZOBR_RS14180 0.21 -1.2 2,983,607 - AZOBR_RS14180 0.21 -0.7 2,983,631 - AZOBR_RS14180 0.24 -0.4 2,983,720 + AZOBR_RS14180 0.32 +2.1 2,983,720 + AZOBR_RS14180 0.32 -0.1 2,983,720 + AZOBR_RS14180 0.32 +1.7 2,983,720 + AZOBR_RS14180 0.32 +0.9 2,983,720 + AZOBR_RS14180 0.32 -0.8 2,983,720 + AZOBR_RS14180 0.32 +0.9 2,983,720 + AZOBR_RS14180 0.32 +1.2 2,983,720 + AZOBR_RS14180 0.32 +2.1 2,983,721 - AZOBR_RS14180 0.32 -0.7 2,983,721 - AZOBR_RS14180 0.32 +1.2 2,983,721 - AZOBR_RS14180 0.32 -2.0 2,983,721 - AZOBR_RS14180 0.32 +0.3 2,983,721 - AZOBR_RS14180 0.32 +0.7 2,983,940 - AZOBR_RS14180 0.52 +1.5 2,983,975 + AZOBR_RS14180 0.56 +0.9 2,983,975 + AZOBR_RS14180 0.56 -0.1 2,983,975 + AZOBR_RS14180 0.56 +1.2 2,983,975 + AZOBR_RS14180 0.56 +0.6 2,983,976 - AZOBR_RS14180 0.56 -0.9 2,983,976 - AZOBR_RS14180 0.56 +0.3 2,983,976 - AZOBR_RS14180 0.56 +1.0 2,984,212 + AZOBR_RS14180 0.78 +1.0 2,984,213 - AZOBR_RS14180 0.78 -0.1 2,984,219 - AZOBR_RS14180 0.78 -0.9 2,984,219 - AZOBR_RS14180 0.78 -0.1 2,984,366 - +0.0 2,984,366 - -0.3 2,984,411 - +0.4 2,984,419 + -0.1 2,984,420 - +0.6 2,984,440 + +1.0 2,984,441 - -0.0 2,984,504 + +0.4 2,984,505 - +0.7 2,984,505 - -0.1 2,984,686 + -4.1 2,984,742 + +1.1 2,984,743 - +1.3 2,984,763 + +0.6 2,984,763 + -1.8
Or see this region's nucleotide sequence