Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13645 and AZOBR_RS13650 are separated by 41 nucleotides AZOBR_RS13650 and AZOBR_RS13655 are separated by 20 nucleotides AZOBR_RS13655 and AZOBR_RS13660 are separated by 14 nucleotides AZOBR_RS13660 and AZOBR_RS13665 are separated by 533 nucleotides
AZOBR_RS13645: AZOBR_RS13645 - hypothetical protein, at 2,894,344 to 2,895,453
_RS13645
AZOBR_RS13650: AZOBR_RS13650 - hypothetical protein, at 2,895,495 to 2,895,758
_RS13650
AZOBR_RS13655: AZOBR_RS13655 - hypothetical protein, at 2,895,779 to 2,896,375
_RS13655
AZOBR_RS13660: AZOBR_RS13660 - hypothetical protein, at 2,896,390 to 2,897,961
_RS13660
AZOBR_RS13665: AZOBR_RS13665 - terminase, at 2,898,495 to 2,899,802
_RS13665
Position (kb)
2896
2897
2898 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2895.673 kb on + strand, within AZOBR_RS13650 at 2895.673 kb on + strand, within AZOBR_RS13650 at 2895.673 kb on + strand, within AZOBR_RS13650 at 2895.674 kb on - strand, within AZOBR_RS13650 at 2895.674 kb on - strand, within AZOBR_RS13650 at 2896.194 kb on + strand, within AZOBR_RS13655 at 2896.195 kb on - strand, within AZOBR_RS13655 at 2896.195 kb on - strand, within AZOBR_RS13655 at 2896.195 kb on - strand, within AZOBR_RS13655 at 2896.195 kb on - strand, within AZOBR_RS13655 at 2896.195 kb on - strand, within AZOBR_RS13655 at 2896.553 kb on - strand, within AZOBR_RS13660 at 2896.754 kb on + strand, within AZOBR_RS13660 at 2896.754 kb on + strand, within AZOBR_RS13660 at 2896.876 kb on + strand, within AZOBR_RS13660 at 2896.876 kb on + strand, within AZOBR_RS13660 at 2897.174 kb on + strand, within AZOBR_RS13660 at 2897.174 kb on + strand, within AZOBR_RS13660 at 2897.175 kb on - strand, within AZOBR_RS13660 at 2897.345 kb on + strand, within AZOBR_RS13660 at 2897.345 kb on + strand, within AZOBR_RS13660 at 2897.346 kb on - strand, within AZOBR_RS13660 at 2897.576 kb on + strand, within AZOBR_RS13660 at 2897.576 kb on + strand, within AZOBR_RS13660 at 2897.577 kb on - strand, within AZOBR_RS13660 at 2897.577 kb on - strand, within AZOBR_RS13660 at 2897.591 kb on + strand, within AZOBR_RS13660 at 2897.591 kb on + strand, within AZOBR_RS13660 at 2897.591 kb on + strand, within AZOBR_RS13660 at 2897.591 kb on + strand, within AZOBR_RS13660 at 2897.591 kb on + strand, within AZOBR_RS13660 at 2897.592 kb on - strand, within AZOBR_RS13660 at 2897.592 kb on - strand, within AZOBR_RS13660 at 2897.592 kb on - strand, within AZOBR_RS13660 at 2897.592 kb on - strand, within AZOBR_RS13660 at 2897.784 kb on - strand, within AZOBR_RS13660 at 2897.784 kb on - strand, within AZOBR_RS13660 at 2897.789 kb on + strand, within AZOBR_RS13660 at 2897.789 kb on + strand, within AZOBR_RS13660 at 2897.869 kb on + strand at 2897.869 kb on + strand at 2897.869 kb on + strand at 2897.869 kb on + strand at 2897.870 kb on - strand at 2897.989 kb on + strand at 2897.989 kb on + strand at 2897.990 kb on - strand at 2897.990 kb on - strand at 2897.990 kb on - strand at 2898.027 kb on - strand at 2898.050 kb on + strand at 2898.050 kb on + strand at 2898.051 kb on - strand at 2898.051 kb on - strand at 2898.051 kb on - strand at 2898.185 kb on + strand at 2898.185 kb on + strand at 2898.185 kb on + strand at 2898.378 kb on - strand at 2898.378 kb on - strand at 2898.378 kb on - strand at 2898.378 kb on - strand at 2898.378 kb on - strand at 2898.378 kb on - strand at 2898.380 kb on + strand at 2898.517 kb on + strand at 2898.518 kb on - strand at 2898.562 kb on + strand at 2898.562 kb on + strand at 2898.562 kb on + strand at 2898.820 kb on + strand, within AZOBR_RS13665 at 2898.820 kb on + strand, within AZOBR_RS13665 at 2898.821 kb on - strand, within AZOBR_RS13665 at 2898.821 kb on - strand, within AZOBR_RS13665 at 2898.892 kb on + strand, within AZOBR_RS13665 at 2898.893 kb on - strand, within AZOBR_RS13665 at 2898.949 kb on + strand, within AZOBR_RS13665 at 2898.949 kb on + strand, within AZOBR_RS13665 at 2898.949 kb on + strand, within AZOBR_RS13665 at 2898.950 kb on - strand, within AZOBR_RS13665 at 2898.950 kb on - strand, within AZOBR_RS13665 at 2898.950 kb on - strand, within AZOBR_RS13665 at 2898.952 kb on + strand, within AZOBR_RS13665 at 2898.953 kb on - strand, within AZOBR_RS13665 at 2898.953 kb on - strand, within AZOBR_RS13665
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 2,895,673 + AZOBR_RS13650 0.67 -0.0 2,895,673 + AZOBR_RS13650 0.67 -1.6 2,895,673 + AZOBR_RS13650 0.67 -2.2 2,895,674 - AZOBR_RS13650 0.68 +0.2 2,895,674 - AZOBR_RS13650 0.68 -0.5 2,896,194 + AZOBR_RS13655 0.70 -0.4 2,896,195 - AZOBR_RS13655 0.70 -0.1 2,896,195 - AZOBR_RS13655 0.70 -0.5 2,896,195 - AZOBR_RS13655 0.70 -0.8 2,896,195 - AZOBR_RS13655 0.70 +0.2 2,896,195 - AZOBR_RS13655 0.70 -2.3 2,896,553 - AZOBR_RS13660 0.10 -0.1 2,896,754 + AZOBR_RS13660 0.23 -1.0 2,896,754 + AZOBR_RS13660 0.23 +1.4 2,896,876 + AZOBR_RS13660 0.31 -0.3 2,896,876 + AZOBR_RS13660 0.31 -0.7 2,897,174 + AZOBR_RS13660 0.50 -2.4 2,897,174 + AZOBR_RS13660 0.50 -3.4 2,897,175 - AZOBR_RS13660 0.50 -2.0 2,897,345 + AZOBR_RS13660 0.61 -1.2 2,897,345 + AZOBR_RS13660 0.61 -1.4 2,897,346 - AZOBR_RS13660 0.61 -0.1 2,897,576 + AZOBR_RS13660 0.75 -0.2 2,897,576 + AZOBR_RS13660 0.75 -2.4 2,897,577 - AZOBR_RS13660 0.76 -4.3 2,897,577 - AZOBR_RS13660 0.76 +0.7 2,897,591 + AZOBR_RS13660 0.76 +0.2 2,897,591 + AZOBR_RS13660 0.76 -0.8 2,897,591 + AZOBR_RS13660 0.76 -2.6 2,897,591 + AZOBR_RS13660 0.76 -1.0 2,897,591 + AZOBR_RS13660 0.76 +0.3 2,897,592 - AZOBR_RS13660 0.76 -1.3 2,897,592 - AZOBR_RS13660 0.76 -1.4 2,897,592 - AZOBR_RS13660 0.76 -0.8 2,897,592 - AZOBR_RS13660 0.76 -0.3 2,897,784 - AZOBR_RS13660 0.89 -1.1 2,897,784 - AZOBR_RS13660 0.89 -0.7 2,897,789 + AZOBR_RS13660 0.89 -1.8 2,897,789 + AZOBR_RS13660 0.89 -2.6 2,897,869 + -1.7 2,897,869 + +0.2 2,897,869 + -0.9 2,897,869 + -0.7 2,897,870 - -2.3 2,897,989 + -1.3 2,897,989 + -0.8 2,897,990 - -0.8 2,897,990 - -0.5 2,897,990 - -0.0 2,898,027 - -0.9 2,898,050 + -1.3 2,898,050 + -1.8 2,898,051 - +0.8 2,898,051 - +0.8 2,898,051 - -0.4 2,898,185 + -1.7 2,898,185 + -1.3 2,898,185 + -0.1 2,898,378 - +1.8 2,898,378 - -0.2 2,898,378 - -1.5 2,898,378 - -1.7 2,898,378 - -1.1 2,898,378 - -1.8 2,898,380 + -1.1 2,898,517 + -1.5 2,898,518 - -0.6 2,898,562 + -0.5 2,898,562 + -0.3 2,898,562 + -4.3 2,898,820 + AZOBR_RS13665 0.25 -0.4 2,898,820 + AZOBR_RS13665 0.25 -0.7 2,898,821 - AZOBR_RS13665 0.25 -1.3 2,898,821 - AZOBR_RS13665 0.25 -0.8 2,898,892 + AZOBR_RS13665 0.30 +0.7 2,898,893 - AZOBR_RS13665 0.30 -1.3 2,898,949 + AZOBR_RS13665 0.35 -0.4 2,898,949 + AZOBR_RS13665 0.35 +2.0 2,898,949 + AZOBR_RS13665 0.35 -0.3 2,898,950 - AZOBR_RS13665 0.35 -1.8 2,898,950 - AZOBR_RS13665 0.35 -1.6 2,898,950 - AZOBR_RS13665 0.35 -0.7 2,898,952 + AZOBR_RS13665 0.35 -0.7 2,898,953 - AZOBR_RS13665 0.35 +0.3 2,898,953 - AZOBR_RS13665 0.35 -2.9
Or see this region's nucleotide sequence