Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS12525
Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | 2-Furfuraldehyde 0.2 vol% |
---|---|---|---|---|---|
remove | |||||
2,642,165 | - | AZOBR_RS12525 | 0.69 | +1.7 | |
2,642,254 | + | AZOBR_RS12525 | 0.81 | -2.6 | |
2,642,254 | + | AZOBR_RS12525 | 0.81 | +0.8 | |
2,642,255 | - | AZOBR_RS12525 | 0.81 | -0.6 | |
2,642,255 | - | AZOBR_RS12525 | 0.81 | -0.4 | |
2,642,255 | - | AZOBR_RS12525 | 0.81 | -0.9 | |
2,642,402 | - | -1.3 | |||
2,642,423 | + | -1.8 | |||
2,642,423 | + | +1.0 | |||
2,642,689 | + | AZOBR_RS12530 | 0.34 | -0.9 | |
2,642,770 | + | AZOBR_RS12530 | 0.49 | -0.3 | |
2,642,770 | + | AZOBR_RS12530 | 0.49 | +0.7 | |
2,642,771 | - | AZOBR_RS12530 | 0.49 | +1.0 | |
2,642,771 | - | AZOBR_RS12530 | 0.49 | -0.5 | |
2,642,816 | - | AZOBR_RS12530 | 0.58 | +0.9 | |
2,642,816 | - | AZOBR_RS12530 | 0.58 | -0.3 | |
2,642,828 | - | AZOBR_RS12530 | 0.60 | -0.7 | |
2,642,974 | + | AZOBR_RS12530 | 0.88 | -0.5 | |
2,642,975 | - | AZOBR_RS12530 | 0.88 | -0.4 | |
2,642,975 | - | AZOBR_RS12530 | 0.88 | -0.4 | |
2,643,122 | - | +0.1 | |||
2,643,122 | - | -0.7 | |||
2,643,125 | + | +0.1 | |||
2,643,125 | + | +1.8 | |||
2,643,125 | + | -0.3 | |||
2,643,125 | + | +0.1 | |||
2,643,125 | + | +0.0 | |||
2,643,125 | + | +0.0 | |||
2,643,126 | - | +1.1 | |||
2,643,126 | - | -0.1 | |||
2,643,126 | - | -0.1 | |||
2,643,126 | - | +0.1 | |||
2,643,126 | - | +0.8 |
Or see this region's nucleotide sequence