Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09680 and AZOBR_RS09685 are separated by 305 nucleotides AZOBR_RS09685 and AZOBR_RS09690 are separated by 145 nucleotides AZOBR_RS09690 and AZOBR_RS09695 are separated by 55 nucleotides
AZOBR_RS09680: AZOBR_RS09680 - N-acetylglucosamine-1-phosphate uridyltransferase, at 2,029,931 to 2,031,286
_RS09680
AZOBR_RS09685: AZOBR_RS09685 - phosphoglycolate phosphatase, at 2,031,592 to 2,032,272
_RS09685
AZOBR_RS09690: AZOBR_RS09690 - hypothetical protein, at 2,032,418 to 2,032,696
_RS09690
AZOBR_RS09695: AZOBR_RS09695 - hypothetical protein, at 2,032,752 to 2,033,486
_RS09695
Position (kb)
2031
2032
2033 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2031.303 kb on - strand at 2031.457 kb on + strand at 2031.457 kb on + strand at 2031.457 kb on + strand at 2031.458 kb on - strand at 2031.458 kb on - strand at 2031.458 kb on - strand at 2031.458 kb on - strand at 2031.489 kb on + strand at 2031.490 kb on - strand at 2031.490 kb on - strand at 2031.490 kb on - strand at 2031.542 kb on + strand at 2031.554 kb on + strand at 2031.842 kb on - strand, within AZOBR_RS09685 at 2031.854 kb on - strand, within AZOBR_RS09685 at 2032.132 kb on - strand, within AZOBR_RS09685 at 2032.174 kb on + strand, within AZOBR_RS09685 at 2032.174 kb on + strand, within AZOBR_RS09685 at 2032.174 kb on + strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.175 kb on - strand, within AZOBR_RS09685 at 2032.176 kb on - strand, within AZOBR_RS09685 at 2032.346 kb on + strand at 2032.346 kb on + strand at 2032.346 kb on + strand at 2032.366 kb on + strand at 2032.367 kb on - strand at 2032.511 kb on - strand, within AZOBR_RS09690 at 2032.655 kb on + strand, within AZOBR_RS09690 at 2032.655 kb on + strand, within AZOBR_RS09690 at 2032.656 kb on - strand, within AZOBR_RS09690 at 2032.656 kb on - strand, within AZOBR_RS09690 at 2033.021 kb on - strand, within AZOBR_RS09695 at 2033.038 kb on + strand, within AZOBR_RS09695 at 2033.038 kb on + strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.039 kb on - strand, within AZOBR_RS09695 at 2033.258 kb on + strand, within AZOBR_RS09695
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 2,031,303 - -1.2 2,031,457 + +1.7 2,031,457 + -0.4 2,031,457 + -0.9 2,031,458 - +2.1 2,031,458 - -0.5 2,031,458 - -0.8 2,031,458 - -0.6 2,031,489 + +0.6 2,031,490 - -0.3 2,031,490 - -2.8 2,031,490 - +0.7 2,031,542 + +3.3 2,031,554 + +0.2 2,031,842 - AZOBR_RS09685 0.37 +0.5 2,031,854 - AZOBR_RS09685 0.38 -2.5 2,032,132 - AZOBR_RS09685 0.79 -0.0 2,032,174 + AZOBR_RS09685 0.85 -0.5 2,032,174 + AZOBR_RS09685 0.85 +0.0 2,032,174 + AZOBR_RS09685 0.85 -0.2 2,032,175 - AZOBR_RS09685 0.86 -0.7 2,032,175 - AZOBR_RS09685 0.86 +0.4 2,032,175 - AZOBR_RS09685 0.86 +0.0 2,032,175 - AZOBR_RS09685 0.86 -0.0 2,032,175 - AZOBR_RS09685 0.86 +1.4 2,032,176 - AZOBR_RS09685 0.86 +1.2 2,032,346 + -0.9 2,032,346 + -0.3 2,032,346 + -2.7 2,032,366 + +0.1 2,032,367 - +0.4 2,032,511 - AZOBR_RS09690 0.33 -0.1 2,032,655 + AZOBR_RS09690 0.85 -1.6 2,032,655 + AZOBR_RS09690 0.85 -0.0 2,032,656 - AZOBR_RS09690 0.85 -0.0 2,032,656 - AZOBR_RS09690 0.85 -2.7 2,033,021 - AZOBR_RS09695 0.37 +0.1 2,033,038 + AZOBR_RS09695 0.39 -0.0 2,033,038 + AZOBR_RS09695 0.39 -0.3 2,033,039 - AZOBR_RS09695 0.39 -0.8 2,033,039 - AZOBR_RS09695 0.39 -2.3 2,033,039 - AZOBR_RS09695 0.39 -0.9 2,033,039 - AZOBR_RS09695 0.39 +0.2 2,033,039 - AZOBR_RS09695 0.39 -1.0 2,033,258 + AZOBR_RS09695 0.69 -0.3
Or see this region's nucleotide sequence