Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09650 and AZOBR_RS09655 are separated by 19 nucleotides AZOBR_RS09655 and AZOBR_RS09660 are separated by 50 nucleotides AZOBR_RS09660 and AZOBR_RS09665 are separated by 87 nucleotides AZOBR_RS09665 and AZOBR_RS09670 are separated by 424 nucleotides
AZOBR_RS09650: AZOBR_RS09650 - lysine transporter LysE, at 2,024,157 to 2,024,780
_RS09650
AZOBR_RS09655: AZOBR_RS09655 - AsnC family transcriptional regulator, at 2,024,800 to 2,025,255
_RS09655
AZOBR_RS09660: AZOBR_RS09660 - Rubredoxin-2 (modular protein), at 2,025,306 to 2,025,599
_RS09660
AZOBR_RS09665: AZOBR_RS09665 - hypothetical protein, at 2,025,687 to 2,027,006
_RS09665
AZOBR_RS09670: AZOBR_RS09670 - hypothetical protein, at 2,027,431 to 2,027,961
_RS09670
Position (kb)
2025
2026
2027
2028 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2024.704 kb on - strand, within AZOBR_RS09650 at 2024.951 kb on + strand, within AZOBR_RS09655 at 2024.951 kb on + strand, within AZOBR_RS09655 at 2024.951 kb on + strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2025.433 kb on + strand, within AZOBR_RS09660 at 2025.434 kb on - strand, within AZOBR_RS09660 at 2025.434 kb on - strand, within AZOBR_RS09660 at 2025.632 kb on + strand at 2025.632 kb on + strand at 2025.633 kb on - strand at 2025.633 kb on - strand at 2026.966 kb on + strand at 2026.967 kb on - strand at 2026.967 kb on - strand at 2027.055 kb on - strand at 2027.102 kb on + strand at 2027.103 kb on - strand at 2027.245 kb on + strand at 2027.245 kb on + strand at 2027.246 kb on - strand at 2027.246 kb on - strand at 2027.273 kb on - strand at 2027.566 kb on + strand, within AZOBR_RS09670 at 2027.567 kb on - strand, within AZOBR_RS09670 at 2027.900 kb on - strand, within AZOBR_RS09670
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 2,024,704 - AZOBR_RS09650 0.88 +0.4 2,024,951 + AZOBR_RS09655 0.33 -0.0 2,024,951 + AZOBR_RS09655 0.33 -1.7 2,024,951 + AZOBR_RS09655 0.33 -0.1 2,024,952 - AZOBR_RS09655 0.33 -0.9 2,024,952 - AZOBR_RS09655 0.33 -0.8 2,024,952 - AZOBR_RS09655 0.33 -1.4 2,024,952 - AZOBR_RS09655 0.33 +0.5 2,025,433 + AZOBR_RS09660 0.43 +0.8 2,025,434 - AZOBR_RS09660 0.44 +0.1 2,025,434 - AZOBR_RS09660 0.44 +0.5 2,025,632 + +2.7 2,025,632 + -1.1 2,025,633 - +0.4 2,025,633 - -2.1 2,026,966 + -1.5 2,026,967 - +0.1 2,026,967 - -0.2 2,027,055 - +0.0 2,027,102 + +0.3 2,027,103 - +1.9 2,027,245 + +2.1 2,027,245 + -0.5 2,027,246 - +1.0 2,027,246 - +0.3 2,027,273 - +1.0 2,027,566 + AZOBR_RS09670 0.25 -1.0 2,027,567 - AZOBR_RS09670 0.26 -0.2 2,027,900 - AZOBR_RS09670 0.88 -0.8
Or see this region's nucleotide sequence