Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08665 and AZOBR_RS08670 are separated by 22 nucleotides AZOBR_RS08670 and AZOBR_RS08675 are separated by 141 nucleotides AZOBR_RS08675 and AZOBR_RS08680 are separated by 55 nucleotides AZOBR_RS08680 and AZOBR_RS08685 are separated by 52 nucleotides
AZOBR_RS08665: AZOBR_RS08665 - amino acid ABC transporter permease, at 1,814,671 to 1,815,774
_RS08665
AZOBR_RS08670: AZOBR_RS08670 - arginine ABC transporter ATP-binding protein, at 1,815,797 to 1,816,573
_RS08670
AZOBR_RS08675: AZOBR_RS08675 - histidinol phosphate aminotransferase, at 1,816,715 to 1,817,800
_RS08675
AZOBR_RS08680: AZOBR_RS08680 - multidrug DMT transporter permease, at 1,817,856 to 1,818,689
_RS08680
AZOBR_RS08685: AZOBR_RS08685 - GNAT family acetyltransferase, at 1,818,742 to 1,819,383
_RS08685
Position (kb) 1816
1817
1818 Strain fitness (log2 ratio) -1
0
1 at 1815.728 kb on - strand at 1815.728 kb on - strand at 1815.876 kb on - strand, within AZOBR_RS08670 at 1816.090 kb on - strand, within AZOBR_RS08670 at 1816.090 kb on - strand, within AZOBR_RS08670 at 1816.241 kb on + strand, within AZOBR_RS08670 at 1816.242 kb on - strand, within AZOBR_RS08670 at 1816.242 kb on - strand, within AZOBR_RS08670 at 1816.857 kb on - strand, within AZOBR_RS08675 at 1816.935 kb on - strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.204 kb on + strand, within AZOBR_RS08675 at 1817.205 kb on - strand, within AZOBR_RS08675 at 1817.205 kb on - strand, within AZOBR_RS08675 at 1817.205 kb on - strand, within AZOBR_RS08675 at 1817.279 kb on + strand, within AZOBR_RS08675 at 1817.306 kb on + strand, within AZOBR_RS08675 at 1817.306 kb on + strand at 1817.307 kb on - strand, within AZOBR_RS08675 at 1817.307 kb on - strand, within AZOBR_RS08675 at 1817.307 kb on - strand, within AZOBR_RS08675 at 1817.594 kb on + strand, within AZOBR_RS08675 at 1817.712 kb on - strand at 1818.575 kb on - strand, within AZOBR_RS08680
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 1,815,728 - +1.1 1,815,728 - -0.9 1,815,876 - AZOBR_RS08670 0.10 +0.8 1,816,090 - AZOBR_RS08670 0.38 +0.8 1,816,090 - AZOBR_RS08670 0.38 +0.4 1,816,241 + AZOBR_RS08670 0.57 +1.1 1,816,242 - AZOBR_RS08670 0.57 -0.6 1,816,242 - AZOBR_RS08670 0.57 -0.4 1,816,857 - AZOBR_RS08675 0.13 +0.5 1,816,935 - AZOBR_RS08675 0.20 +0.1 1,817,204 + AZOBR_RS08675 0.45 +0.1 1,817,204 + AZOBR_RS08675 0.45 +0.5 1,817,204 + AZOBR_RS08675 0.45 -0.1 1,817,204 + AZOBR_RS08675 0.45 -1.3 1,817,204 + AZOBR_RS08675 0.45 -0.2 1,817,204 + AZOBR_RS08675 0.45 +0.3 1,817,204 + AZOBR_RS08675 0.45 -0.0 1,817,205 - AZOBR_RS08675 0.45 +0.6 1,817,205 - AZOBR_RS08675 0.45 +0.4 1,817,205 - AZOBR_RS08675 0.45 -0.4 1,817,279 + AZOBR_RS08675 0.52 +0.1 1,817,306 + AZOBR_RS08675 0.54 -1.4 1,817,306 + +1.1 1,817,307 - AZOBR_RS08675 0.55 -0.4 1,817,307 - AZOBR_RS08675 0.55 -0.2 1,817,307 - AZOBR_RS08675 0.55 +1.3 1,817,594 + AZOBR_RS08675 0.81 +1.3 1,817,712 - -0.1 1,818,575 - AZOBR_RS08680 0.86 +0.1
Or see this region's nucleotide sequence