Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07955 and AZOBR_RS07960 are separated by 79 nucleotides AZOBR_RS07960 and AZOBR_RS07965 are separated by 255 nucleotides
AZOBR_RS07955: AZOBR_RS07955 - tartronate semialdehyde reductase, at 1,677,470 to 1,678,378
_RS07955
AZOBR_RS07960: AZOBR_RS07960 - hydroxypyruvate isomerase, at 1,678,458 to 1,679,255
_RS07960
AZOBR_RS07965: AZOBR_RS07965 - glyoxylate carboligase, at 1,679,511 to 1,681,280
_RS07965
Position (kb) 1678
1679
1680 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1678.038 kb on + strand, within AZOBR_RS07955 at 1678.293 kb on + strand at 1678.534 kb on + strand at 1678.535 kb on - strand at 1678.559 kb on - strand, within AZOBR_RS07960 at 1678.594 kb on + strand, within AZOBR_RS07960 at 1678.594 kb on + strand, within AZOBR_RS07960 at 1678.594 kb on + strand, within AZOBR_RS07960 at 1678.595 kb on - strand, within AZOBR_RS07960 at 1678.717 kb on + strand, within AZOBR_RS07960 at 1678.717 kb on + strand, within AZOBR_RS07960 at 1678.727 kb on - strand, within AZOBR_RS07960 at 1678.795 kb on + strand, within AZOBR_RS07960 at 1678.795 kb on + strand, within AZOBR_RS07960 at 1678.796 kb on - strand, within AZOBR_RS07960 at 1678.978 kb on + strand, within AZOBR_RS07960 at 1679.155 kb on + strand, within AZOBR_RS07960 at 1679.155 kb on + strand, within AZOBR_RS07960 at 1679.156 kb on - strand, within AZOBR_RS07960 at 1679.156 kb on - strand, within AZOBR_RS07960 at 1679.221 kb on + strand at 1679.221 kb on + strand at 1679.221 kb on + strand at 1679.761 kb on + strand, within AZOBR_RS07965 at 1679.858 kb on - strand, within AZOBR_RS07965 at 1679.884 kb on + strand, within AZOBR_RS07965 at 1679.884 kb on + strand, within AZOBR_RS07965 at 1679.884 kb on + strand, within AZOBR_RS07965 at 1679.884 kb on + strand, within AZOBR_RS07965 at 1679.941 kb on + strand, within AZOBR_RS07965 at 1679.941 kb on + strand, within AZOBR_RS07965 at 1680.061 kb on + strand, within AZOBR_RS07965 at 1680.061 kb on + strand, within AZOBR_RS07965 at 1680.061 kb on + strand, within AZOBR_RS07965 at 1680.061 kb on + strand, within AZOBR_RS07965 at 1680.062 kb on - strand, within AZOBR_RS07965 at 1680.062 kb on - strand, within AZOBR_RS07965 at 1680.115 kb on + strand, within AZOBR_RS07965 at 1680.115 kb on + strand, within AZOBR_RS07965 at 1680.116 kb on - strand, within AZOBR_RS07965 at 1680.116 kb on - strand, within AZOBR_RS07965 at 1680.154 kb on + strand, within AZOBR_RS07965
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 1,678,038 + AZOBR_RS07955 0.62 -0.8 1,678,293 + -2.8 1,678,534 + -1.1 1,678,535 - +1.9 1,678,559 - AZOBR_RS07960 0.13 +0.1 1,678,594 + AZOBR_RS07960 0.17 -0.6 1,678,594 + AZOBR_RS07960 0.17 -0.3 1,678,594 + AZOBR_RS07960 0.17 +0.1 1,678,595 - AZOBR_RS07960 0.17 +2.3 1,678,717 + AZOBR_RS07960 0.32 -0.1 1,678,717 + AZOBR_RS07960 0.32 -0.9 1,678,727 - AZOBR_RS07960 0.34 -1.9 1,678,795 + AZOBR_RS07960 0.42 +0.9 1,678,795 + AZOBR_RS07960 0.42 -0.4 1,678,796 - AZOBR_RS07960 0.42 +0.4 1,678,978 + AZOBR_RS07960 0.65 -1.0 1,679,155 + AZOBR_RS07960 0.87 -0.2 1,679,155 + AZOBR_RS07960 0.87 -0.5 1,679,156 - AZOBR_RS07960 0.87 +0.8 1,679,156 - AZOBR_RS07960 0.87 +0.0 1,679,221 + +0.9 1,679,221 + -0.4 1,679,221 + -0.5 1,679,761 + AZOBR_RS07965 0.14 +1.1 1,679,858 - AZOBR_RS07965 0.20 -0.4 1,679,884 + AZOBR_RS07965 0.21 -2.8 1,679,884 + AZOBR_RS07965 0.21 +0.0 1,679,884 + AZOBR_RS07965 0.21 -0.4 1,679,884 + AZOBR_RS07965 0.21 +2.7 1,679,941 + AZOBR_RS07965 0.24 +1.4 1,679,941 + AZOBR_RS07965 0.24 -0.7 1,680,061 + AZOBR_RS07965 0.31 +0.2 1,680,061 + AZOBR_RS07965 0.31 -0.5 1,680,061 + AZOBR_RS07965 0.31 -0.5 1,680,061 + AZOBR_RS07965 0.31 -0.2 1,680,062 - AZOBR_RS07965 0.31 -0.7 1,680,062 - AZOBR_RS07965 0.31 -0.0 1,680,115 + AZOBR_RS07965 0.34 +0.6 1,680,115 + AZOBR_RS07965 0.34 -0.4 1,680,116 - AZOBR_RS07965 0.34 +0.4 1,680,116 - AZOBR_RS07965 0.34 -0.5 1,680,154 + AZOBR_RS07965 0.36 +0.6
Or see this region's nucleotide sequence