Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07765 and AZOBR_RS07770 are separated by 18 nucleotides AZOBR_RS07770 and AZOBR_RS07775 overlap by 4 nucleotides AZOBR_RS07775 and AZOBR_RS07780 are separated by 259 nucleotides AZOBR_RS07780 and AZOBR_RS07785 are separated by 196 nucleotides
AZOBR_RS07765: AZOBR_RS07765 - O-acetylhomoserine aminocarboxypropyltransferase, at 1,638,077 to 1,639,366
_RS07765
AZOBR_RS07770: AZOBR_RS07770 - CoA-binding protein, at 1,639,385 to 1,639,903
_RS07770
AZOBR_RS07775: AZOBR_RS07775 - enoyl-CoA hydratase, at 1,639,900 to 1,640,706
_RS07775
AZOBR_RS07780: AZOBR_RS07780 - thioesterase, at 1,640,966 to 1,641,436
_RS07780
AZOBR_RS07785: AZOBR_RS07785 - 50S ribosomal protein L13, at 1,641,633 to 1,642,097
_RS07785
Position (kb)
1639
1640
1641 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1639.030 kb on - strand, within AZOBR_RS07765 at 1639.194 kb on + strand, within AZOBR_RS07765 at 1639.194 kb on + strand, within AZOBR_RS07765 at 1639.194 kb on + strand, within AZOBR_RS07765 at 1639.195 kb on - strand, within AZOBR_RS07765 at 1639.272 kb on + strand at 1639.273 kb on - strand at 1639.273 kb on - strand at 1639.386 kb on + strand at 1639.387 kb on - strand at 1639.770 kb on + strand, within AZOBR_RS07770 at 1639.770 kb on + strand, within AZOBR_RS07770 at 1639.771 kb on - strand, within AZOBR_RS07770 at 1639.771 kb on - strand, within AZOBR_RS07770 at 1639.872 kb on + strand at 1639.872 kb on + strand at 1639.873 kb on - strand at 1640.000 kb on + strand, within AZOBR_RS07775 at 1640.001 kb on - strand, within AZOBR_RS07775 at 1640.006 kb on + strand, within AZOBR_RS07775 at 1640.007 kb on - strand, within AZOBR_RS07775 at 1640.007 kb on - strand, within AZOBR_RS07775 at 1640.312 kb on + strand, within AZOBR_RS07775 at 1640.313 kb on - strand, within AZOBR_RS07775 at 1640.444 kb on + strand, within AZOBR_RS07775 at 1640.799 kb on - strand at 1640.799 kb on - strand at 1641.039 kb on - strand, within AZOBR_RS07780 at 1641.039 kb on - strand, within AZOBR_RS07780 at 1641.093 kb on - strand, within AZOBR_RS07780 at 1641.167 kb on + strand, within AZOBR_RS07780 at 1641.168 kb on - strand, within AZOBR_RS07780 at 1641.305 kb on + strand, within AZOBR_RS07780 at 1641.368 kb on + strand, within AZOBR_RS07780 at 1641.368 kb on + strand, within AZOBR_RS07780 at 1641.368 kb on + strand, within AZOBR_RS07780 at 1641.368 kb on + strand, within AZOBR_RS07780
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 1,639,030 - AZOBR_RS07765 0.74 +0.9 1,639,194 + AZOBR_RS07765 0.87 -0.1 1,639,194 + AZOBR_RS07765 0.87 +1.0 1,639,194 + AZOBR_RS07765 0.87 -0.2 1,639,195 - AZOBR_RS07765 0.87 -1.9 1,639,272 + +0.5 1,639,273 - -0.7 1,639,273 - +0.2 1,639,386 + -0.1 1,639,387 - +0.4 1,639,770 + AZOBR_RS07770 0.74 -1.4 1,639,770 + AZOBR_RS07770 0.74 +1.3 1,639,771 - AZOBR_RS07770 0.74 -1.5 1,639,771 - AZOBR_RS07770 0.74 +0.9 1,639,872 + +0.7 1,639,872 + -1.0 1,639,873 - -0.3 1,640,000 + AZOBR_RS07775 0.12 +0.3 1,640,001 - AZOBR_RS07775 0.13 -0.6 1,640,006 + AZOBR_RS07775 0.13 +1.0 1,640,007 - AZOBR_RS07775 0.13 -0.7 1,640,007 - AZOBR_RS07775 0.13 +0.6 1,640,312 + AZOBR_RS07775 0.51 -1.4 1,640,313 - AZOBR_RS07775 0.51 +0.4 1,640,444 + AZOBR_RS07775 0.67 -1.1 1,640,799 - -0.8 1,640,799 - -1.4 1,641,039 - AZOBR_RS07780 0.15 +0.4 1,641,039 - AZOBR_RS07780 0.15 +0.5 1,641,093 - AZOBR_RS07780 0.27 +0.2 1,641,167 + AZOBR_RS07780 0.43 +0.6 1,641,168 - AZOBR_RS07780 0.43 +0.9 1,641,305 + AZOBR_RS07780 0.72 +0.2 1,641,368 + AZOBR_RS07780 0.85 +0.5 1,641,368 + AZOBR_RS07780 0.85 -2.8 1,641,368 + AZOBR_RS07780 0.85 +1.0 1,641,368 + AZOBR_RS07780 0.85 -0.6
Or see this region's nucleotide sequence