Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06155 and AZOBR_RS06160 are separated by 43 nucleotides AZOBR_RS06160 and AZOBR_RS06165 are separated by 13 nucleotides AZOBR_RS06165 and AZOBR_RS06170 overlap by 17 nucleotides AZOBR_RS06170 and AZOBR_RS06175 are separated by 216 nucleotides
AZOBR_RS06155: AZOBR_RS06155 - 6-phosphofructokinase, at 1,304,821 to 1,305,906
_RS06155
AZOBR_RS06160: AZOBR_RS06160 - hypothetical protein, at 1,305,950 to 1,306,408
_RS06160
AZOBR_RS06165: AZOBR_RS06165 - GCN5 family N-acetyltransferase, at 1,306,422 to 1,307,009
_RS06165
AZOBR_RS06170: AZOBR_RS06170 - hypothetical protein, at 1,306,993 to 1,307,385
_RS06170
AZOBR_RS06175: AZOBR_RS06175 - hypothetical protein, at 1,307,602 to 1,309,398
_RS06175
Position (kb) 1306
1307
1308 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 1305.595 kb on + strand, within AZOBR_RS06155 at 1305.613 kb on + strand, within AZOBR_RS06155 at 1305.614 kb on - strand, within AZOBR_RS06155 at 1305.835 kb on + strand at 1305.835 kb on + strand at 1305.835 kb on + strand at 1305.836 kb on - strand at 1305.836 kb on - strand at 1305.990 kb on - strand at 1306.214 kb on + strand, within AZOBR_RS06160 at 1306.214 kb on + strand, within AZOBR_RS06160 at 1306.214 kb on + strand, within AZOBR_RS06160 at 1306.706 kb on - strand, within AZOBR_RS06165 at 1306.706 kb on - strand, within AZOBR_RS06165 at 1306.940 kb on + strand, within AZOBR_RS06165 at 1306.941 kb on - strand, within AZOBR_RS06165 at 1307.060 kb on - strand, within AZOBR_RS06170 at 1307.061 kb on - strand, within AZOBR_RS06170 at 1307.061 kb on - strand, within AZOBR_RS06170 at 1307.061 kb on - strand, within AZOBR_RS06170 at 1307.167 kb on + strand, within AZOBR_RS06170 at 1307.430 kb on + strand at 1307.465 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 1,305,595 + AZOBR_RS06155 0.71 -1.3 1,305,613 + AZOBR_RS06155 0.73 -0.0 1,305,614 - AZOBR_RS06155 0.73 -3.2 1,305,835 + +0.1 1,305,835 + -1.1 1,305,835 + +0.9 1,305,836 - +0.7 1,305,836 - +2.5 1,305,990 - +0.4 1,306,214 + AZOBR_RS06160 0.58 -0.7 1,306,214 + AZOBR_RS06160 0.58 +0.1 1,306,214 + AZOBR_RS06160 0.58 +0.1 1,306,706 - AZOBR_RS06165 0.48 +0.3 1,306,706 - AZOBR_RS06165 0.48 -0.3 1,306,940 + AZOBR_RS06165 0.88 +1.3 1,306,941 - AZOBR_RS06165 0.88 +1.3 1,307,060 - AZOBR_RS06170 0.17 +2.1 1,307,061 - AZOBR_RS06170 0.17 -1.0 1,307,061 - AZOBR_RS06170 0.17 +3.1 1,307,061 - AZOBR_RS06170 0.17 +0.1 1,307,167 + AZOBR_RS06170 0.44 -0.4 1,307,430 + -0.9 1,307,465 - +0.8
Or see this region's nucleotide sequence