Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS05265 and AZOBR_RS05270 are separated by 11 nucleotides AZOBR_RS05270 and AZOBR_RS05275 are separated by 213 nucleotides
AZOBR_RS05265: AZOBR_RS05265 - formate dehydrogenase, at 1,118,673 to 1,119,731
_RS05265
AZOBR_RS05270: AZOBR_RS05270 - exported protein of unknown function, at 1,119,743 to 1,120,132
_RS05270
AZOBR_RS05275: AZOBR_RS05275 - hypothetical protein, at 1,120,346 to 1,121,203
_RS05275
Position (kb)
1119
1120
1121 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.877 kb on + strand, within AZOBR_RS05265 at 1118.878 kb on - strand, within AZOBR_RS05265 at 1118.878 kb on - strand, within AZOBR_RS05265 at 1118.967 kb on + strand, within AZOBR_RS05265 at 1118.967 kb on + strand, within AZOBR_RS05265 at 1118.968 kb on - strand, within AZOBR_RS05265 at 1118.968 kb on - strand, within AZOBR_RS05265 at 1119.237 kb on + strand, within AZOBR_RS05265 at 1119.237 kb on + strand, within AZOBR_RS05265 at 1119.238 kb on - strand, within AZOBR_RS05265 at 1119.561 kb on + strand, within AZOBR_RS05265 at 1119.561 kb on + strand, within AZOBR_RS05265 at 1119.562 kb on - strand, within AZOBR_RS05265 at 1119.562 kb on - strand, within AZOBR_RS05265 at 1119.873 kb on - strand, within AZOBR_RS05270 at 1119.873 kb on - strand, within AZOBR_RS05270 at 1119.929 kb on + strand, within AZOBR_RS05270 at 1120.074 kb on - strand, within AZOBR_RS05270 at 1120.147 kb on - strand at 1120.173 kb on - strand at 1120.424 kb on + strand at 1120.760 kb on + strand, within AZOBR_RS05275 at 1120.797 kb on - strand, within AZOBR_RS05275 at 1120.988 kb on - strand, within AZOBR_RS05275 at 1120.988 kb on - strand, within AZOBR_RS05275
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 1,118,877 + AZOBR_RS05265 0.19 +0.4 1,118,877 + AZOBR_RS05265 0.19 +0.9 1,118,877 + AZOBR_RS05265 0.19 -0.7 1,118,877 + AZOBR_RS05265 0.19 +0.9 1,118,877 + AZOBR_RS05265 0.19 +0.2 1,118,877 + AZOBR_RS05265 0.19 +2.5 1,118,878 - AZOBR_RS05265 0.19 +1.1 1,118,878 - AZOBR_RS05265 0.19 +1.1 1,118,967 + AZOBR_RS05265 0.28 -1.3 1,118,967 + AZOBR_RS05265 0.28 -2.7 1,118,968 - AZOBR_RS05265 0.28 +1.1 1,118,968 - AZOBR_RS05265 0.28 +0.3 1,119,237 + AZOBR_RS05265 0.53 -0.5 1,119,237 + AZOBR_RS05265 0.53 -0.1 1,119,238 - AZOBR_RS05265 0.53 -0.2 1,119,561 + AZOBR_RS05265 0.84 -2.6 1,119,561 + AZOBR_RS05265 0.84 -0.5 1,119,562 - AZOBR_RS05265 0.84 -1.5 1,119,562 - AZOBR_RS05265 0.84 -0.6 1,119,873 - AZOBR_RS05270 0.33 -0.9 1,119,873 - AZOBR_RS05270 0.33 -0.4 1,119,929 + AZOBR_RS05270 0.48 -1.2 1,120,074 - AZOBR_RS05270 0.85 -0.6 1,120,147 - -1.5 1,120,173 - +0.0 1,120,424 + +0.5 1,120,760 + AZOBR_RS05275 0.48 -0.9 1,120,797 - AZOBR_RS05275 0.53 -1.4 1,120,988 - AZOBR_RS05275 0.75 -0.1 1,120,988 - AZOBR_RS05275 0.75 -1.9
Or see this region's nucleotide sequence