Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04630 and AZOBR_RS04635 overlap by 4 nucleotides AZOBR_RS04635 and AZOBR_RS04640 are separated by 116 nucleotides
AZOBR_RS04630: AZOBR_RS04630 - oxidoreductase, at 974,949 to 976,034
_RS04630
AZOBR_RS04635: AZOBR_RS04635 - oxidoreductase, at 976,031 to 976,774
_RS04635
AZOBR_RS04640: AZOBR_RS04640 - C4-dicarboxylate ABC transporter, at 976,891 to 978,171
_RS04640
Position (kb) 976
977 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 975.142 kb on + strand, within AZOBR_RS04630 at 975.432 kb on + strand, within AZOBR_RS04630 at 975.432 kb on + strand, within AZOBR_RS04630 at 975.432 kb on + strand, within AZOBR_RS04630 at 975.448 kb on + strand, within AZOBR_RS04630 at 975.466 kb on + strand, within AZOBR_RS04630 at 975.467 kb on - strand, within AZOBR_RS04630 at 975.467 kb on - strand, within AZOBR_RS04630 at 975.856 kb on + strand, within AZOBR_RS04630 at 975.856 kb on + strand, within AZOBR_RS04630 at 975.857 kb on - strand, within AZOBR_RS04630 at 975.857 kb on - strand, within AZOBR_RS04630 at 975.857 kb on - strand, within AZOBR_RS04630 at 976.101 kb on + strand at 976.101 kb on + strand at 976.102 kb on - strand at 976.102 kb on - strand at 976.202 kb on + strand, within AZOBR_RS04635 at 976.202 kb on + strand, within AZOBR_RS04635 at 976.203 kb on - strand, within AZOBR_RS04635 at 976.761 kb on - strand at 976.761 kb on - strand at 976.761 kb on - strand at 976.997 kb on + strand at 976.997 kb on + strand at 976.997 kb on + strand at 976.998 kb on - strand at 976.998 kb on - strand at 976.998 kb on - strand at 977.304 kb on - strand, within AZOBR_RS04640 at 977.304 kb on - strand, within AZOBR_RS04640 at 977.406 kb on - strand, within AZOBR_RS04640 at 977.432 kb on + strand, within AZOBR_RS04640 at 977.432 kb on + strand, within AZOBR_RS04640 at 977.433 kb on - strand, within AZOBR_RS04640 at 977.606 kb on + strand, within AZOBR_RS04640
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 975,142 + AZOBR_RS04630 0.18 -0.6 975,432 + AZOBR_RS04630 0.44 +0.2 975,432 + AZOBR_RS04630 0.44 -0.1 975,432 + AZOBR_RS04630 0.44 +0.2 975,448 + AZOBR_RS04630 0.46 -0.3 975,466 + AZOBR_RS04630 0.48 -2.7 975,467 - AZOBR_RS04630 0.48 +0.6 975,467 - AZOBR_RS04630 0.48 +0.1 975,856 + AZOBR_RS04630 0.84 +0.3 975,856 + AZOBR_RS04630 0.84 -1.1 975,857 - AZOBR_RS04630 0.84 +0.3 975,857 - AZOBR_RS04630 0.84 -1.3 975,857 - AZOBR_RS04630 0.84 +0.1 976,101 + +0.0 976,101 + +0.7 976,102 - +0.0 976,102 - -0.5 976,202 + AZOBR_RS04635 0.23 -1.6 976,202 + AZOBR_RS04635 0.23 +0.3 976,203 - AZOBR_RS04635 0.23 -0.0 976,761 - -3.2 976,761 - +0.4 976,761 - -1.7 976,997 + -1.3 976,997 + -0.1 976,997 + -1.0 976,998 - +0.7 976,998 - +0.5 976,998 - +1.3 977,304 - AZOBR_RS04640 0.32 -0.7 977,304 - AZOBR_RS04640 0.32 +0.1 977,406 - AZOBR_RS04640 0.40 -1.7 977,432 + AZOBR_RS04640 0.42 -1.4 977,432 + AZOBR_RS04640 0.42 -0.3 977,433 - AZOBR_RS04640 0.42 +0.0 977,606 + AZOBR_RS04640 0.56 +0.5
Or see this region's nucleotide sequence