Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS02100 and AZOBR_RS02105 are separated by 681 nucleotides AZOBR_RS02105 and AZOBR_RS02110 are separated by 22 nucleotides
AZOBR_RS02100: AZOBR_RS02100 - pirin, at 430,508 to 431,440
_RS02100
AZOBR_RS02105: AZOBR_RS02105 - hypothetical protein, at 432,122 to 432,700
_RS02105
AZOBR_RS02110: AZOBR_RS02110 - protein-PII uridylyltransferase, at 432,723 to 435,524
_RS02110
Position (kb) 432
433 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 431.127 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.304 kb on + strand, within AZOBR_RS02100 at 431.305 kb on - strand, within AZOBR_RS02100 at 431.440 kb on + strand at 431.440 kb on + strand at 431.441 kb on - strand at 431.441 kb on - strand at 431.516 kb on + strand at 431.516 kb on + strand at 431.527 kb on + strand at 431.528 kb on - strand at 431.542 kb on - strand at 431.549 kb on - strand at 431.549 kb on - strand at 431.659 kb on + strand at 431.659 kb on + strand at 431.660 kb on - strand at 431.832 kb on + strand at 431.833 kb on + strand at 431.833 kb on - strand at 431.837 kb on - strand at 431.837 kb on - strand at 431.932 kb on + strand at 432.074 kb on - strand at 432.617 kb on + strand, within AZOBR_RS02105 at 432.702 kb on - strand at 432.702 kb on - strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.820 kb on + strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.821 kb on - strand at 432.910 kb on + strand at 433.408 kb on + strand, within AZOBR_RS02110 at 433.409 kb on - strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.558 kb on + strand, within AZOBR_RS02110 at 433.559 kb on - strand, within AZOBR_RS02110
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 431,127 + AZOBR_RS02100 0.66 +1.7 431,304 + AZOBR_RS02100 0.85 -0.1 431,304 + AZOBR_RS02100 0.85 +0.6 431,304 + AZOBR_RS02100 0.85 -0.2 431,304 + AZOBR_RS02100 0.85 +0.1 431,305 - AZOBR_RS02100 0.85 -0.6 431,440 + -0.1 431,440 + +2.7 431,441 - -1.3 431,441 - -0.2 431,516 + +0.4 431,516 + +2.9 431,527 + +1.0 431,528 - -1.6 431,542 - -1.9 431,549 - -0.2 431,549 - -0.2 431,659 + +0.9 431,659 + +0.2 431,660 - -0.4 431,832 + +1.6 431,833 + -1.0 431,833 - +0.8 431,837 - +1.2 431,837 - +0.5 431,932 + -1.2 432,074 - -0.6 432,617 + AZOBR_RS02105 0.85 +1.0 432,702 - +0.5 432,702 - -1.5 432,820 + -1.3 432,820 + +0.3 432,820 + +0.0 432,821 - -0.2 432,821 - +0.7 432,821 - +0.1 432,821 - +0.9 432,821 - -0.3 432,910 + -0.7 433,408 + AZOBR_RS02110 0.24 -0.5 433,409 - AZOBR_RS02110 0.24 +0.3 433,558 + AZOBR_RS02110 0.30 -0.4 433,558 + AZOBR_RS02110 0.30 -0.1 433,559 - AZOBR_RS02110 0.30 -0.3
Or see this region's nucleotide sequence