Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS02080

Experiment: 2-Furfuraldehyde 0.2 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS02075 and AZOBR_RS02080 are separated by 61 nucleotidesAZOBR_RS02080 and AZOBR_RS02085 are separated by 134 nucleotides AZOBR_RS02075: AZOBR_RS02075 - tryptophanyl-tRNA synthetase, at 423,128 to 424,126 _RS02075 AZOBR_RS02080: AZOBR_RS02080 - multidrug transporter MurJ, at 424,188 to 425,762 _RS02080 AZOBR_RS02085: AZOBR_RS02085 - histidine kinase, at 425,897 to 428,401 _RS02085 Position (kb) 424 425 426Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 424.694 kb on - strand, within AZOBR_RS02080at 424.846 kb on + strand, within AZOBR_RS02080at 424.846 kb on + strand, within AZOBR_RS02080at 424.847 kb on - strand, within AZOBR_RS02080at 424.847 kb on - strand, within AZOBR_RS02080at 424.963 kb on + strand, within AZOBR_RS02080at 424.963 kb on + strand, within AZOBR_RS02080at 424.967 kb on - strand, within AZOBR_RS02080at 424.967 kb on - strand, within AZOBR_RS02080at 425.353 kb on + strand, within AZOBR_RS02080at 426.243 kb on - strand, within AZOBR_RS02085at 426.503 kb on + strand, within AZOBR_RS02085at 426.698 kb on + strand, within AZOBR_RS02085at 426.698 kb on + strand, within AZOBR_RS02085at 426.698 kb on + strand, within AZOBR_RS02085at 426.698 kb on + strand, within AZOBR_RS02085at 426.698 kb on + strand, within AZOBR_RS02085at 426.698 kb on + strand, within AZOBR_RS02085at 426.699 kb on - strand, within AZOBR_RS02085at 426.699 kb on - strand, within AZOBR_RS02085

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Per-strain Table

Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol%
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424,694 - AZOBR_RS02080 0.32 -1.3
424,846 + AZOBR_RS02080 0.42 -1.8
424,846 + AZOBR_RS02080 0.42 +2.0
424,847 - AZOBR_RS02080 0.42 +1.0
424,847 - AZOBR_RS02080 0.42 -0.4
424,963 + AZOBR_RS02080 0.49 +0.6
424,963 + AZOBR_RS02080 0.49 -0.5
424,967 - AZOBR_RS02080 0.49 -0.7
424,967 - AZOBR_RS02080 0.49 -3.4
425,353 + AZOBR_RS02080 0.74 +0.2
426,243 - AZOBR_RS02085 0.14 +1.0
426,503 + AZOBR_RS02085 0.24 -0.6
426,698 + AZOBR_RS02085 0.32 +1.5
426,698 + AZOBR_RS02085 0.32 +2.0
426,698 + AZOBR_RS02085 0.32 +0.7
426,698 + AZOBR_RS02085 0.32 +1.0
426,698 + AZOBR_RS02085 0.32 +0.2
426,698 + AZOBR_RS02085 0.32 -1.1
426,699 - AZOBR_RS02085 0.32 +0.8
426,699 - AZOBR_RS02085 0.32 +0.9

Or see this region's nucleotide sequence