Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01735 and AZOBR_RS01740 are separated by 6 nucleotides AZOBR_RS01740 and AZOBR_RS01745 are separated by 99 nucleotides AZOBR_RS01745 and AZOBR_RS01750 are separated by 48 nucleotides AZOBR_RS01750 and AZOBR_RS01755 are separated by 427 nucleotides
AZOBR_RS01735: AZOBR_RS01735 - death-on-curing protein, at 355,464 to 355,907
_RS01735
AZOBR_RS01740: AZOBR_RS01740 - AbrB family transcriptional regulator, at 355,914 to 356,138
_RS01740
AZOBR_RS01745: AZOBR_RS01745 - membrane protein, at 356,238 to 356,666
_RS01745
AZOBR_RS01750: AZOBR_RS01750 - uroporphyrinogen decarboxylase, at 356,715 to 357,761
_RS01750
AZOBR_RS01755: AZOBR_RS01755 - hypothetical protein, at 358,189 to 359,037
_RS01755
Position (kb) 356
357
358 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 355.744 kb on + strand, within AZOBR_RS01735 at 355.745 kb on - strand, within AZOBR_RS01735 at 355.759 kb on + strand, within AZOBR_RS01735 at 355.877 kb on - strand at 355.916 kb on - strand at 355.987 kb on + strand, within AZOBR_RS01740 at 356.171 kb on - strand at 356.171 kb on - strand at 356.183 kb on + strand at 356.232 kb on - strand at 357.790 kb on - strand at 357.790 kb on - strand at 357.790 kb on - strand at 357.825 kb on - strand at 357.825 kb on - strand at 357.995 kb on - strand at 357.995 kb on - strand at 358.023 kb on + strand at 358.048 kb on - strand at 358.669 kb on + strand, within AZOBR_RS01755 at 358.669 kb on + strand, within AZOBR_RS01755 at 358.669 kb on + strand, within AZOBR_RS01755 at 358.669 kb on + strand, within AZOBR_RS01755 at 358.669 kb on + strand, within AZOBR_RS01755
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 355,744 + AZOBR_RS01735 0.63 +0.1 355,745 - AZOBR_RS01735 0.63 +0.1 355,759 + AZOBR_RS01735 0.66 +0.3 355,877 - -4.3 355,916 - -0.0 355,987 + AZOBR_RS01740 0.32 -1.4 356,171 - +0.7 356,171 - +0.9 356,183 + +1.0 356,232 - -0.1 357,790 - +0.4 357,790 - -0.3 357,790 - +0.4 357,825 - +0.1 357,825 - +0.5 357,995 - -0.6 357,995 - +0.1 358,023 + -1.3 358,048 - +0.2 358,669 + AZOBR_RS01755 0.57 -0.9 358,669 + AZOBR_RS01755 0.57 -1.1 358,669 + AZOBR_RS01755 0.57 -1.8 358,669 + AZOBR_RS01755 0.57 -0.8 358,669 + AZOBR_RS01755 0.57 -0.8
Or see this region's nucleotide sequence