Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01530 and AZOBR_RS01535 are separated by 21 nucleotides AZOBR_RS01535 and AZOBR_RS01540 are separated by 96 nucleotides AZOBR_RS01540 and AZOBR_RS01545 overlap by 4 nucleotides
AZOBR_RS01530: AZOBR_RS01530 - conserved membrane protein of unknown function, at 315,157 to 316,623
_RS01530
AZOBR_RS01535: AZOBR_RS01535 - universal stress protein, at 316,645 to 317,097
_RS01535
AZOBR_RS01540: AZOBR_RS01540 - hypothetical protein, at 317,194 to 317,973
_RS01540
AZOBR_RS01545: AZOBR_RS01545 - permease, at 317,970 to 318,887
_RS01545
Position (kb) 316
317
318 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 315.670 kb on + strand, within AZOBR_RS01530 at 315.670 kb on + strand, within AZOBR_RS01530 at 315.671 kb on - strand, within AZOBR_RS01530 at 315.704 kb on - strand, within AZOBR_RS01530 at 315.962 kb on - strand, within AZOBR_RS01530 at 315.962 kb on - strand, within AZOBR_RS01530 at 315.964 kb on + strand, within AZOBR_RS01530 at 315.964 kb on + strand, within AZOBR_RS01530 at 315.965 kb on - strand, within AZOBR_RS01530 at 316.226 kb on - strand, within AZOBR_RS01530 at 316.396 kb on + strand, within AZOBR_RS01530 at 316.396 kb on + strand, within AZOBR_RS01530 at 316.397 kb on - strand, within AZOBR_RS01530 at 316.397 kb on - strand, within AZOBR_RS01530 at 316.423 kb on + strand, within AZOBR_RS01530 at 316.424 kb on - strand, within AZOBR_RS01530 at 316.452 kb on + strand, within AZOBR_RS01530 at 316.453 kb on - strand, within AZOBR_RS01530 at 316.453 kb on - strand, within AZOBR_RS01530 at 316.504 kb on + strand at 316.613 kb on - strand at 316.646 kb on + strand at 316.646 kb on + strand at 316.647 kb on - strand at 316.647 kb on - strand at 316.998 kb on - strand, within AZOBR_RS01535 at 316.998 kb on - strand, within AZOBR_RS01535 at 316.998 kb on - strand, within AZOBR_RS01535 at 317.264 kb on + strand at 317.264 kb on + strand at 317.265 kb on - strand at 317.390 kb on + strand, within AZOBR_RS01540 at 317.391 kb on - strand, within AZOBR_RS01540 at 317.391 kb on - strand, within AZOBR_RS01540 at 317.391 kb on - strand, within AZOBR_RS01540 at 317.391 kb on - strand, within AZOBR_RS01540 at 317.391 kb on - strand, within AZOBR_RS01540 at 317.420 kb on + strand, within AZOBR_RS01540 at 317.420 kb on + strand, within AZOBR_RS01540 at 317.420 kb on + strand, within AZOBR_RS01540 at 317.420 kb on + strand, within AZOBR_RS01540 at 317.420 kb on + strand, within AZOBR_RS01540 at 317.421 kb on - strand, within AZOBR_RS01540 at 317.421 kb on - strand, within AZOBR_RS01540 at 317.651 kb on + strand, within AZOBR_RS01540 at 317.651 kb on + strand, within AZOBR_RS01540 at 317.651 kb on + strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand at 317.652 kb on - strand, within AZOBR_RS01540 at 317.652 kb on - strand, within AZOBR_RS01540
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 315,670 + AZOBR_RS01530 0.35 -0.8 315,670 + AZOBR_RS01530 0.35 -0.9 315,671 - AZOBR_RS01530 0.35 -0.3 315,704 - AZOBR_RS01530 0.37 +1.0 315,962 - AZOBR_RS01530 0.55 +2.2 315,962 - AZOBR_RS01530 0.55 +0.3 315,964 + AZOBR_RS01530 0.55 -0.6 315,964 + AZOBR_RS01530 0.55 +0.7 315,965 - AZOBR_RS01530 0.55 +1.3 316,226 - AZOBR_RS01530 0.73 +0.1 316,396 + AZOBR_RS01530 0.84 +0.1 316,396 + AZOBR_RS01530 0.84 -1.0 316,397 - AZOBR_RS01530 0.85 +0.2 316,397 - AZOBR_RS01530 0.85 +2.8 316,423 + AZOBR_RS01530 0.86 +0.9 316,424 - AZOBR_RS01530 0.86 -0.3 316,452 + AZOBR_RS01530 0.88 -0.4 316,453 - AZOBR_RS01530 0.88 -0.5 316,453 - AZOBR_RS01530 0.88 -0.2 316,504 + +0.0 316,613 - -0.0 316,646 + -0.2 316,646 + -1.0 316,647 - +1.2 316,647 - -1.0 316,998 - AZOBR_RS01535 0.78 +0.8 316,998 - AZOBR_RS01535 0.78 +1.4 316,998 - AZOBR_RS01535 0.78 +1.0 317,264 + -0.3 317,264 + -0.2 317,265 - +0.0 317,390 + AZOBR_RS01540 0.25 -1.2 317,391 - AZOBR_RS01540 0.25 +0.6 317,391 - AZOBR_RS01540 0.25 +0.8 317,391 - AZOBR_RS01540 0.25 -2.2 317,391 - AZOBR_RS01540 0.25 -0.7 317,391 - AZOBR_RS01540 0.25 +0.2 317,420 + AZOBR_RS01540 0.29 -0.6 317,420 + AZOBR_RS01540 0.29 +1.0 317,420 + AZOBR_RS01540 0.29 -0.9 317,420 + AZOBR_RS01540 0.29 -0.3 317,420 + AZOBR_RS01540 0.29 +0.3 317,421 - AZOBR_RS01540 0.29 -0.3 317,421 - AZOBR_RS01540 0.29 +0.2 317,651 + AZOBR_RS01540 0.59 -0.5 317,651 + AZOBR_RS01540 0.59 -1.0 317,651 + AZOBR_RS01540 0.59 -1.2 317,652 - AZOBR_RS01540 0.59 -0.3 317,652 - AZOBR_RS01540 0.59 -0.3 317,652 - AZOBR_RS01540 0.59 -0.5 317,652 - AZOBR_RS01540 0.59 +0.8 317,652 - AZOBR_RS01540 0.59 +0.6 317,652 - AZOBR_RS01540 0.59 +1.0 317,652 - AZOBR_RS01540 0.59 -1.6 317,652 - AZOBR_RS01540 0.59 +1.6 317,652 - +0.0 317,652 - AZOBR_RS01540 0.59 +0.3 317,652 - AZOBR_RS01540 0.59 +0.5
Or see this region's nucleotide sequence