Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01500 and AZOBR_RS01505 are separated by 44 nucleotides AZOBR_RS01505 and AZOBR_RS01510 are separated by 101 nucleotides AZOBR_RS01510 and AZOBR_RS01515 are separated by 173 nucleotides
AZOBR_RS01500: AZOBR_RS01500 - alanine acetyltransferase, at 310,085 to 310,549
_RS01500
AZOBR_RS01505: AZOBR_RS01505 - peptidase, at 310,594 to 311,280
_RS01505
AZOBR_RS01510: AZOBR_RS01510 - D-alanyl-D-alanine dipeptidase, at 311,382 to 311,933
_RS01510
AZOBR_RS01515: AZOBR_RS01515 - chitin deacetylase, at 312,107 to 313,147
_RS01515
Position (kb) 311
312 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 311.349 kb on - strand at 311.433 kb on + strand at 311.433 kb on + strand at 311.434 kb on - strand at 311.434 kb on - strand at 311.469 kb on + strand, within AZOBR_RS01510 at 311.565 kb on + strand, within AZOBR_RS01510 at 311.628 kb on + strand, within AZOBR_RS01510 at 311.628 kb on + strand, within AZOBR_RS01510 at 311.629 kb on - strand, within AZOBR_RS01510 at 311.629 kb on - strand, within AZOBR_RS01510 at 311.841 kb on + strand, within AZOBR_RS01510 at 311.841 kb on + strand, within AZOBR_RS01510 at 311.842 kb on - strand, within AZOBR_RS01510 at 311.842 kb on - strand, within AZOBR_RS01510 at 311.999 kb on + strand at 311.999 kb on + strand at 311.999 kb on + strand at 311.999 kb on + strand at 311.999 kb on + strand at 312.000 kb on - strand at 312.000 kb on - strand at 312.000 kb on - strand at 312.000 kb on - strand at 312.000 kb on - strand at 312.000 kb on - strand at 312.000 kb on - strand at 312.000 kb on - strand at 312.228 kb on - strand, within AZOBR_RS01515 at 312.317 kb on + strand, within AZOBR_RS01515 at 312.317 kb on + strand, within AZOBR_RS01515 at 312.317 kb on + strand, within AZOBR_RS01515 at 312.423 kb on - strand, within AZOBR_RS01515
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 311,349 - -3.6 311,433 + +0.7 311,433 + +0.8 311,434 - +0.5 311,434 - +0.2 311,469 + AZOBR_RS01510 0.16 -2.1 311,565 + AZOBR_RS01510 0.33 +0.1 311,628 + AZOBR_RS01510 0.45 +1.2 311,628 + AZOBR_RS01510 0.45 -0.0 311,629 - AZOBR_RS01510 0.45 +0.4 311,629 - AZOBR_RS01510 0.45 +2.7 311,841 + AZOBR_RS01510 0.83 -1.1 311,841 + AZOBR_RS01510 0.83 -0.1 311,842 - AZOBR_RS01510 0.83 +0.2 311,842 - AZOBR_RS01510 0.83 +0.6 311,999 + -0.0 311,999 + -1.9 311,999 + -1.3 311,999 + -1.1 311,999 + -0.1 312,000 - -0.3 312,000 - +0.3 312,000 - +0.0 312,000 - -1.5 312,000 - -2.6 312,000 - -0.6 312,000 - +0.2 312,000 - -3.7 312,228 - AZOBR_RS01515 0.12 -0.7 312,317 + AZOBR_RS01515 0.20 -0.3 312,317 + AZOBR_RS01515 0.20 +0.8 312,317 + AZOBR_RS01515 0.20 -0.1 312,423 - AZOBR_RS01515 0.30 -2.3
Or see this region's nucleotide sequence