Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01050 and AZOBR_RS01055 are separated by 88 nucleotides AZOBR_RS01055 and AZOBR_RS01060 are separated by 356 nucleotides AZOBR_RS01060 and AZOBR_RS01065 are separated by 281 nucleotides
AZOBR_RS01050: AZOBR_RS01050 - hypothetical protein, at 212,590 to 215,127
_RS01050
AZOBR_RS01055: AZOBR_RS01055 - cold-shock protein, at 215,216 to 215,425
_RS01055
AZOBR_RS01060: AZOBR_RS01060 - ATPase AAA, at 215,782 to 217,218
_RS01060
AZOBR_RS01065: AZOBR_RS01065 - phosphopantothenate synthase, at 217,500 to 218,756
_RS01065
Position (kb) 215
216
217
218 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 215.195 kb on - strand at 215.609 kb on - strand at 215.823 kb on - strand at 215.823 kb on - strand at 215.823 kb on - strand at 216.152 kb on + strand, within AZOBR_RS01060 at 216.153 kb on - strand, within AZOBR_RS01060 at 216.153 kb on - strand, within AZOBR_RS01060 at 216.153 kb on - strand, within AZOBR_RS01060 at 216.311 kb on + strand, within AZOBR_RS01060 at 216.311 kb on + strand, within AZOBR_RS01060 at 216.311 kb on + strand, within AZOBR_RS01060 at 216.311 kb on + strand, within AZOBR_RS01060 at 216.312 kb on - strand, within AZOBR_RS01060 at 216.312 kb on - strand, within AZOBR_RS01060 at 216.312 kb on - strand, within AZOBR_RS01060 at 216.312 kb on - strand, within AZOBR_RS01060 at 216.753 kb on - strand, within AZOBR_RS01060 at 216.795 kb on - strand, within AZOBR_RS01060 at 216.917 kb on + strand, within AZOBR_RS01060 at 217.157 kb on + strand at 217.157 kb on + strand at 217.274 kb on + strand at 217.301 kb on + strand at 217.301 kb on + strand at 217.302 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 215,195 - -1.0 215,609 - -0.1 215,823 - -1.2 215,823 - -0.3 215,823 - -0.5 216,152 + AZOBR_RS01060 0.26 -0.9 216,153 - AZOBR_RS01060 0.26 -0.2 216,153 - AZOBR_RS01060 0.26 +0.5 216,153 - AZOBR_RS01060 0.26 -0.1 216,311 + AZOBR_RS01060 0.37 -1.6 216,311 + AZOBR_RS01060 0.37 +0.1 216,311 + AZOBR_RS01060 0.37 -1.8 216,311 + AZOBR_RS01060 0.37 -0.2 216,312 - AZOBR_RS01060 0.37 +0.3 216,312 - AZOBR_RS01060 0.37 -0.6 216,312 - AZOBR_RS01060 0.37 -0.4 216,312 - AZOBR_RS01060 0.37 -0.2 216,753 - AZOBR_RS01060 0.68 -3.0 216,795 - AZOBR_RS01060 0.70 -0.1 216,917 + AZOBR_RS01060 0.79 +0.2 217,157 + +0.7 217,157 + -0.1 217,274 + -1.0 217,301 + -1.2 217,301 + -1.1 217,302 - +0.3
Or see this region's nucleotide sequence