Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00910 and AZOBR_RS00915 are separated by 69 nucleotides AZOBR_RS00915 and AZOBR_RS00920 are separated by 399 nucleotides
AZOBR_RS00910: AZOBR_RS00910 - proline iminopeptidase, at 181,326 to 182,276
_RS00910
AZOBR_RS00915: AZOBR_RS00915 - nuclease, at 182,346 to 183,182
_RS00915
AZOBR_RS00920: AZOBR_RS00920 - peptidase, at 183,582 to 184,904
_RS00920
Position (kb) 182
183
184 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 181.484 kb on - strand, within AZOBR_RS00910 at 181.576 kb on + strand, within AZOBR_RS00910 at 181.576 kb on + strand, within AZOBR_RS00910 at 181.577 kb on - strand, within AZOBR_RS00910 at 181.675 kb on + strand, within AZOBR_RS00910 at 181.741 kb on + strand, within AZOBR_RS00910 at 181.742 kb on - strand, within AZOBR_RS00910 at 181.742 kb on - strand, within AZOBR_RS00910 at 181.828 kb on + strand, within AZOBR_RS00910 at 182.198 kb on - strand at 182.316 kb on + strand at 182.316 kb on + strand at 182.316 kb on + strand at 182.317 kb on - strand at 182.317 kb on - strand at 182.317 kb on - strand at 183.428 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.654 kb on + strand at 183.655 kb on - strand at 183.766 kb on - strand, within AZOBR_RS00920 at 183.766 kb on - strand, within AZOBR_RS00920 at 183.771 kb on + strand, within AZOBR_RS00920 at 183.771 kb on + strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 183.772 kb on - strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.032 kb on + strand, within AZOBR_RS00920 at 184.033 kb on - strand, within AZOBR_RS00920 at 184.105 kb on - strand, within AZOBR_RS00920 at 184.105 kb on - strand, within AZOBR_RS00920
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 181,484 - AZOBR_RS00910 0.17 -2.8 181,576 + AZOBR_RS00910 0.26 +1.3 181,576 + AZOBR_RS00910 0.26 +0.5 181,577 - AZOBR_RS00910 0.26 -0.2 181,675 + AZOBR_RS00910 0.37 -0.0 181,741 + AZOBR_RS00910 0.44 -1.0 181,742 - AZOBR_RS00910 0.44 +0.2 181,742 - AZOBR_RS00910 0.44 +1.7 181,828 + AZOBR_RS00910 0.53 -2.4 182,198 - +1.0 182,316 + -0.2 182,316 + -0.1 182,316 + -1.0 182,317 - +1.0 182,317 - +0.0 182,317 - -0.2 183,428 + +1.5 183,654 + -0.9 183,654 + -1.0 183,654 + +0.4 183,654 + -1.2 183,654 + -0.1 183,654 + -0.3 183,655 - -0.0 183,766 - AZOBR_RS00920 0.14 +0.3 183,766 - AZOBR_RS00920 0.14 -0.3 183,771 + AZOBR_RS00920 0.14 -3.1 183,771 + AZOBR_RS00920 0.14 +0.7 183,772 - AZOBR_RS00920 0.14 +0.4 183,772 - AZOBR_RS00920 0.14 +0.3 183,772 - AZOBR_RS00920 0.14 +0.7 184,032 + AZOBR_RS00920 0.34 -0.7 184,032 + AZOBR_RS00920 0.34 +0.3 184,032 + AZOBR_RS00920 0.34 -0.8 184,033 - AZOBR_RS00920 0.34 +0.3 184,105 - AZOBR_RS00920 0.40 +0.1 184,105 - AZOBR_RS00920 0.40 -0.4
Or see this region's nucleotide sequence