Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00895 and AZOBR_RS00900 are separated by 122 nucleotides AZOBR_RS00900 and AZOBR_RS00905 are separated by 21 nucleotides AZOBR_RS00905 and AZOBR_RS00910 are separated by 179 nucleotides AZOBR_RS00910 and AZOBR_RS00915 are separated by 69 nucleotides
AZOBR_RS00895: AZOBR_RS00895 - phenylalanyl-tRNA synthetase subunit alpha, at 179,363 to 180,430
_RS00895
AZOBR_RS00900: AZOBR_RS00900 - 50S ribosomal protein L20, at 180,553 to 180,924
_RS00900
AZOBR_RS00905: AZOBR_RS00905 - 50S ribosomal protein L35, at 180,946 to 181,146
_RS00905
AZOBR_RS00910: AZOBR_RS00910 - proline iminopeptidase, at 181,326 to 182,276
_RS00910
AZOBR_RS00915: AZOBR_RS00915 - nuclease, at 182,346 to 183,182
_RS00915
Position (kb) 181
182
183 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 180.466 kb on - strand at 181.321 kb on - strand at 181.333 kb on + strand at 181.334 kb on - strand at 181.484 kb on - strand, within AZOBR_RS00910 at 181.576 kb on + strand, within AZOBR_RS00910 at 181.576 kb on + strand, within AZOBR_RS00910 at 181.577 kb on - strand, within AZOBR_RS00910 at 181.675 kb on + strand, within AZOBR_RS00910 at 181.741 kb on + strand, within AZOBR_RS00910 at 181.742 kb on - strand, within AZOBR_RS00910 at 181.742 kb on - strand, within AZOBR_RS00910 at 181.828 kb on + strand, within AZOBR_RS00910 at 182.198 kb on - strand at 182.316 kb on + strand at 182.316 kb on + strand at 182.316 kb on + strand at 182.317 kb on - strand at 182.317 kb on - strand at 182.317 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 180,466 - -0.3 181,321 - -1.0 181,333 + +0.3 181,334 - +0.5 181,484 - AZOBR_RS00910 0.17 -2.8 181,576 + AZOBR_RS00910 0.26 +1.3 181,576 + AZOBR_RS00910 0.26 +0.5 181,577 - AZOBR_RS00910 0.26 -0.2 181,675 + AZOBR_RS00910 0.37 -0.0 181,741 + AZOBR_RS00910 0.44 -1.0 181,742 - AZOBR_RS00910 0.44 +0.2 181,742 - AZOBR_RS00910 0.44 +1.7 181,828 + AZOBR_RS00910 0.53 -2.4 182,198 - +1.0 182,316 + -0.2 182,316 + -0.1 182,316 + -1.0 182,317 - +1.0 182,317 - +0.0 182,317 - -0.2
Or see this region's nucleotide sequence