Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00860 and AZOBR_RS00865 are separated by 172 nucleotides AZOBR_RS00865 and AZOBR_RS00870 are separated by 323 nucleotides
AZOBR_RS00860: AZOBR_RS00860 - elongation factor 4, at 169,124 to 170,926
_RS00860
AZOBR_RS00865: AZOBR_RS00865 - membrane protein, at 171,099 to 171,836
_RS00865
AZOBR_RS00870: AZOBR_RS00870 - LysR family transcriptional regulator, at 172,160 to 173,044
_RS00870
Position (kb) 171
172 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 170.255 kb on + strand, within AZOBR_RS00860 at 170.256 kb on - strand, within AZOBR_RS00860 at 171.159 kb on + strand at 171.160 kb on - strand at 171.174 kb on + strand, within AZOBR_RS00865 at 171.174 kb on + strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.175 kb on - strand, within AZOBR_RS00865 at 171.423 kb on + strand, within AZOBR_RS00865 at 171.424 kb on - strand, within AZOBR_RS00865 at 171.424 kb on - strand, within AZOBR_RS00865 at 171.544 kb on - strand, within AZOBR_RS00865 at 171.544 kb on - strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.611 kb on + strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 171.612 kb on - strand, within AZOBR_RS00865 at 172.077 kb on + strand at 172.084 kb on + strand at 172.084 kb on + strand at 172.085 kb on - strand at 172.370 kb on + strand, within AZOBR_RS00870 at 172.371 kb on - strand, within AZOBR_RS00870 at 172.586 kb on + strand, within AZOBR_RS00870
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 170,255 + AZOBR_RS00860 0.63 -2.0 170,256 - AZOBR_RS00860 0.63 +0.7 171,159 + +0.5 171,160 - -0.4 171,174 + AZOBR_RS00865 0.10 -0.7 171,174 + AZOBR_RS00865 0.10 -1.1 171,175 - AZOBR_RS00865 0.10 -0.7 171,175 - AZOBR_RS00865 0.10 -3.3 171,175 - AZOBR_RS00865 0.10 -0.6 171,175 - AZOBR_RS00865 0.10 +1.6 171,423 + AZOBR_RS00865 0.44 +0.2 171,424 - AZOBR_RS00865 0.44 -1.6 171,424 - AZOBR_RS00865 0.44 +0.1 171,544 - AZOBR_RS00865 0.60 +0.4 171,544 - AZOBR_RS00865 0.60 +0.0 171,611 + AZOBR_RS00865 0.69 -1.5 171,611 + AZOBR_RS00865 0.69 -3.0 171,611 + AZOBR_RS00865 0.69 -0.7 171,611 + AZOBR_RS00865 0.69 +0.3 171,611 + AZOBR_RS00865 0.69 -0.9 171,612 - AZOBR_RS00865 0.70 -0.4 171,612 - AZOBR_RS00865 0.70 -0.0 171,612 - AZOBR_RS00865 0.70 +0.2 171,612 - AZOBR_RS00865 0.70 -0.8 172,077 + -1.3 172,084 + +0.0 172,084 + +2.3 172,085 - -0.0 172,370 + AZOBR_RS00870 0.24 +0.3 172,371 - AZOBR_RS00870 0.24 +0.1 172,586 + AZOBR_RS00870 0.48 -0.5
Or see this region's nucleotide sequence