Experiment: 2-Furfuraldehyde 0.2 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00675 and AZOBR_RS00680 are separated by 3 nucleotides AZOBR_RS00680 and AZOBR_RS00685 are separated by 122 nucleotides AZOBR_RS00685 and AZOBR_RS00690 are separated by 121 nucleotides
AZOBR_RS00675: AZOBR_RS00675 - ABC transporter permease, at 133,720 to 134,409
_RS00675
AZOBR_RS00680: AZOBR_RS00680 - ABC transporter permease, at 134,413 to 135,117
_RS00680
AZOBR_RS00685: AZOBR_RS00685 - amino acid ABC transporter substrate-binding protein, at 135,240 to 136,076
_RS00685
AZOBR_RS00690: AZOBR_RS00690 - ATP-binding protein, at 136,198 to 137,004
_RS00690
Position (kb) 135
136
137 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 134.244 kb on - strand, within AZOBR_RS00675 at 134.244 kb on - strand, within AZOBR_RS00675 at 134.493 kb on - strand, within AZOBR_RS00680 at 134.513 kb on + strand, within AZOBR_RS00680 at 134.513 kb on + strand, within AZOBR_RS00680 at 134.513 kb on + strand, within AZOBR_RS00680 at 134.513 kb on + strand, within AZOBR_RS00680 at 134.514 kb on - strand, within AZOBR_RS00680 at 134.514 kb on - strand, within AZOBR_RS00680 at 134.649 kb on - strand, within AZOBR_RS00680 at 134.834 kb on + strand, within AZOBR_RS00680 at 134.835 kb on - strand, within AZOBR_RS00680 at 134.835 kb on - strand, within AZOBR_RS00680 at 134.900 kb on + strand, within AZOBR_RS00680 at 134.901 kb on - strand, within AZOBR_RS00680 at 134.901 kb on - strand, within AZOBR_RS00680 at 134.901 kb on - strand, within AZOBR_RS00680 at 134.901 kb on - strand, within AZOBR_RS00680 at 134.942 kb on + strand, within AZOBR_RS00680 at 134.942 kb on + strand, within AZOBR_RS00680 at 134.942 kb on + strand, within AZOBR_RS00680 at 134.942 kb on + strand, within AZOBR_RS00680 at 134.943 kb on - strand, within AZOBR_RS00680 at 135.210 kb on - strand at 135.226 kb on - strand at 135.226 kb on - strand at 135.532 kb on + strand, within AZOBR_RS00685 at 135.533 kb on - strand, within AZOBR_RS00685 at 135.533 kb on - strand, within AZOBR_RS00685 at 135.673 kb on + strand, within AZOBR_RS00685 at 135.673 kb on + strand, within AZOBR_RS00685 at 135.673 kb on + strand, within AZOBR_RS00685 at 135.817 kb on + strand, within AZOBR_RS00685 at 135.817 kb on + strand, within AZOBR_RS00685 at 135.967 kb on + strand, within AZOBR_RS00685 at 136.119 kb on - strand at 136.119 kb on - strand at 136.535 kb on + strand, within AZOBR_RS00690
Per-strain Table
Position Strand Gene LocusTag Fraction 2-Furfuraldehyde 0.2 vol% remove 134,244 - AZOBR_RS00675 0.76 -0.8 134,244 - AZOBR_RS00675 0.76 +0.3 134,493 - AZOBR_RS00680 0.11 +0.6 134,513 + AZOBR_RS00680 0.14 +0.6 134,513 + AZOBR_RS00680 0.14 +0.1 134,513 + AZOBR_RS00680 0.14 -1.3 134,513 + AZOBR_RS00680 0.14 +0.1 134,514 - AZOBR_RS00680 0.14 -0.8 134,514 - AZOBR_RS00680 0.14 -0.5 134,649 - AZOBR_RS00680 0.33 -1.3 134,834 + AZOBR_RS00680 0.60 +0.7 134,835 - AZOBR_RS00680 0.60 -0.5 134,835 - AZOBR_RS00680 0.60 +0.4 134,900 + AZOBR_RS00680 0.69 -0.4 134,901 - AZOBR_RS00680 0.69 +0.2 134,901 - AZOBR_RS00680 0.69 +2.2 134,901 - AZOBR_RS00680 0.69 -0.7 134,901 - AZOBR_RS00680 0.69 -0.6 134,942 + AZOBR_RS00680 0.75 +0.8 134,942 + AZOBR_RS00680 0.75 -0.0 134,942 + AZOBR_RS00680 0.75 -0.4 134,942 + AZOBR_RS00680 0.75 +0.1 134,943 - AZOBR_RS00680 0.75 +0.0 135,210 - -0.4 135,226 - +0.2 135,226 - +0.7 135,532 + AZOBR_RS00685 0.35 -0.6 135,533 - AZOBR_RS00685 0.35 -1.2 135,533 - AZOBR_RS00685 0.35 -1.0 135,673 + AZOBR_RS00685 0.52 -3.4 135,673 + AZOBR_RS00685 0.52 -0.9 135,673 + AZOBR_RS00685 0.52 -0.4 135,817 + AZOBR_RS00685 0.69 -1.9 135,817 + AZOBR_RS00685 0.69 -1.2 135,967 + AZOBR_RS00685 0.87 +0.4 136,119 - -3.0 136,119 - +0.8 136,535 + AZOBR_RS00690 0.42 +0.2
Or see this region's nucleotide sequence