Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_65

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
66,991	+				+1.3
66,992	-				-1.8
66,992	-		Pf1N1B4_63	0.41	-1.8
67,322	-				-0.2
67,390	-				-0.2
67,394	+				+1.2
67,394	+				-0.8
67,395	-				-2.2
67,395	-				+0.6
67,408	-				-1.5
67,408	-				-0.2
67,433	+				-0.2
67,434	-				+0.8
67,451	+				-0.2
67,741	+				+0.7
67,741	+				+1.1
67,838	+				+0.3
67,838	+				-0.8
67,839	-				-0.3
67,839	-				-1.2
67,923	+				+0.2
67,923	+				-0.2
67,923	+				+0.2
67,924	-				-1.2
67,924	-				+0.2
67,924	-				-0.7
67,924	-				-1.1
67,924	-				-0.8
67,924	-				-2.6
67,924	-				+0.5
67,924	-				+1.8
67,927	-				+2.1
67,927	-				+1.2
68,011	-		Pf1N1B4_65	0.10	+0.2
68,011	-		Pf1N1B4_65	0.10	+0.0
68,019	+		Pf1N1B4_65	0.11	+0.8
68,019	+		Pf1N1B4_65	0.11	-0.7
68,019	+		Pf1N1B4_65	0.11	-0.2
68,020	-		Pf1N1B4_65	0.11	-0.8
68,020	-		Pf1N1B4_65	0.11	-2.2
68,020	-		Pf1N1B4_65	0.11	-0.8
68,020	-		Pf1N1B4_65	0.11	-1.2
68,122	-		Pf1N1B4_65	0.24	-1.2
68,122	-		Pf1N1B4_65	0.24	-0.5
68,232	-		Pf1N1B4_65	0.37	+0.2
68,245	+		Pf1N1B4_65	0.39	+0.2
68,246	-				-0.8
68,292	+		Pf1N1B4_65	0.44	-0.8
68,293	-		Pf1N1B4_65	0.44	-0.2
68,293	-		Pf1N1B4_65	0.44	+0.2
68,293	-		Pf1N1B4_65	0.44	-1.8
68,293	-		Pf1N1B4_65	0.44	-2.4
68,293	-		Pf1N1B4_65	0.44	+0.8
68,293	-		Pf1N1B4_65	0.44	+0.3
68,484	+		Pf1N1B4_65	0.67	-1.2
68,485	-		Pf1N1B4_65	0.67	-0.0
68,485	-		Pf1N1B4_65	0.67	-0.2
68,485	-		Pf1N1B4_65	0.67	-1.0
68,619	+		Pf1N1B4_65	0.84	-2.6
68,619	+		Pf1N1B4_65	0.84	-0.2
68,619	+				-0.2
68,620	-		Pf1N1B4_65	0.84	+0.3
68,620	-		Pf1N1B4_65	0.84	-1.2
68,698	-				-0.2
68,698	-				-0.5
68,709	+				-1.1
68,710	-				-1.2
68,871	-		Pf1N1B4_66	0.10	-0.2
69,038	+		Pf1N1B4_66	0.41	-0.6
69,045	-		Pf1N1B4_66	0.42	-0.9
69,045	-		Pf1N1B4_66	0.42	+0.3
69,045	-		Pf1N1B4_66	0.42	+0.9
69,045	-		Pf1N1B4_66	0.42	-0.2
69,045	-				+1.3
69,045	-		Pf1N1B4_66	0.42	+0.1
69,129	+		Pf1N1B4_66	0.58	-0.1
69,130	-		Pf1N1B4_66	0.58	+0.5
69,130	-		Pf1N1B4_66	0.58	-0.5
69,141	-		Pf1N1B4_66	0.60	+0.4
69,141	-		Pf1N1B4_66	0.60	+1.3
69,141	-		Pf1N1B4_66	0.60	+1.5
69,141	-		Pf1N1B4_66	0.60	+1.6
69,141	-				-0.8
69,150	+		Pf1N1B4_66	0.62	-0.7
69,207	-		Pf1N1B4_66	0.73	+0.6
69,207	-		Pf1N1B4_66	0.73	+0.5
69,271	+		Pf1N1B4_66	0.85	+1.1
69,330	+				-1.2
69,330	+				+0.5
69,395	+				-2.8
69,432	+				-1.0
69,432	+				+1.9
69,433	-				+0.9
69,433	-				-2.2
69,433	-				-0.2
69,433	-				-1.4
69,473	+				+0.3
69,474	-				+1.0
69,474	-				+1.1
69,476	-				+0.2
69,476	-				-0.8
69,639	-		Pf1N1B4_67	0.20	-0.7
69,729	+		Pf1N1B4_67	0.33	-1.0