Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
Pf1N1B4_5451 - hypothetical protein, at 197,785 to 198,030
_5451
Position (kb) 197
198
199 Strain fitness (log2 ratio) -2
-1
0
1
2 at 196.835 kb on + strand at 196.835 kb on + strand at 196.835 kb on + strand at 196.836 kb on - strand at 196.876 kb on + strand at 197.012 kb on + strand at 197.012 kb on + strand at 197.013 kb on - strand at 197.039 kb on + strand at 197.040 kb on - strand at 197.154 kb on + strand at 197.162 kb on + strand at 197.162 kb on + strand at 197.163 kb on - strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.241 kb on + strand at 197.242 kb on - strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.310 kb on + strand at 197.311 kb on - strand at 197.311 kb on - strand at 197.311 kb on - strand at 197.311 kb on - strand at 197.339 kb on - strand at 197.339 kb on - strand at 197.339 kb on - strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.342 kb on + strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.343 kb on - strand at 197.378 kb on - strand at 197.378 kb on - strand at 197.388 kb on + strand at 197.422 kb on + strand at 197.425 kb on + strand at 197.425 kb on + strand at 197.475 kb on - strand at 197.537 kb on + strand at 197.537 kb on + strand at 197.537 kb on + strand at 197.562 kb on - strand at 197.562 kb on - strand at 197.623 kb on + strand at 197.623 kb on + strand at 197.624 kb on - strand at 197.639 kb on + strand at 197.735 kb on + strand at 197.741 kb on + strand at 197.741 kb on + strand at 197.741 kb on + strand at 197.741 kb on + strand at 197.780 kb on + strand at 197.781 kb on - strand at 197.781 kb on - strand at 197.809 kb on - strand at 197.856 kb on + strand, within Pf1N1B4_5451 at 197.857 kb on - strand, within Pf1N1B4_5451 at 197.943 kb on - strand, within Pf1N1B4_5451 at 197.957 kb on + strand at 197.957 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 197.992 kb on + strand, within Pf1N1B4_5451 at 198.028 kb on + strand at 198.029 kb on - strand at 198.029 kb on - strand at 198.029 kb on - strand at 198.072 kb on + strand at 198.072 kb on + strand at 198.073 kb on - strand at 198.081 kb on + strand at 198.206 kb on + strand at 198.206 kb on + strand at 198.273 kb on + strand at 198.273 kb on + strand at 198.273 kb on + strand at 198.282 kb on + strand at 198.283 kb on - strand at 198.283 kb on - strand at 198.283 kb on - strand at 198.309 kb on + strand at 198.309 kb on + strand at 198.309 kb on + strand at 198.404 kb on - strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.441 kb on + strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.442 kb on - strand at 198.635 kb on + strand at 198.636 kb on - strand at 198.636 kb on - strand at 198.661 kb on + strand at 198.709 kb on + strand at 198.709 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.793 kb on + strand at 198.794 kb on - strand at 198.895 kb on - strand at 198.981 kb on + strand at 198.982 kb on - strand at 198.982 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 196,835 + -1.5 196,835 + +1.1 196,835 + +1.4 196,836 - -0.9 196,876 + +0.7 197,012 + -0.4 197,012 + -0.2 197,013 - +0.1 197,039 + -0.3 197,040 - -0.3 197,154 + -0.6 197,162 + +0.6 197,162 + -1.2 197,163 - -0.6 197,241 + -0.5 197,241 + -0.1 197,241 + -0.1 197,241 + -1.5 197,241 + -0.2 197,242 - +0.0 197,310 + +0.5 197,310 + +1.3 197,310 + -0.6 197,310 + +0.3 197,310 + -0.2 197,311 - -0.9 197,311 - +0.1 197,311 - +0.4 197,311 - +0.4 197,339 - -0.5 197,339 - -1.1 197,339 - -0.2 197,342 + +1.1 197,342 + -0.3 197,342 + -0.3 197,342 + -0.2 197,342 + +0.4 197,343 - -0.3 197,343 - -1.1 197,343 - -1.9 197,343 - +0.1 197,343 - +0.1 197,343 - +0.6 197,343 - +1.4 197,343 - +0.1 197,378 - +0.8 197,378 - -0.6 197,388 + +0.3 197,422 + -0.8 197,425 + +1.0 197,425 + +0.1 197,475 - -0.4 197,537 + -0.6 197,537 + -0.9 197,537 + +0.9 197,562 - -1.2 197,562 - +0.1 197,623 + -0.1 197,623 + -1.9 197,624 - +0.6 197,639 + +0.1 197,735 + -0.2 197,741 + +0.1 197,741 + +0.1 197,741 + -0.2 197,741 + -0.9 197,780 + -1.5 197,781 - +0.0 197,781 - -0.2 197,809 - -0.9 197,856 + Pf1N1B4_5451 0.29 -0.4 197,857 - Pf1N1B4_5451 0.29 -0.5 197,943 - Pf1N1B4_5451 0.64 +0.1 197,957 + +0.5 197,957 + Pf1N1B4_5451 0.70 -0.3 197,992 + Pf1N1B4_5451 0.84 -0.6 197,992 + Pf1N1B4_5451 0.84 -1.2 197,992 + Pf1N1B4_5451 0.84 -0.6 197,992 + Pf1N1B4_5451 0.84 +0.1 198,028 + +0.3 198,029 - -0.2 198,029 - +0.4 198,029 - -0.9 198,072 + -0.7 198,072 + +0.2 198,073 - +0.5 198,081 + -1.3 198,206 + -0.4 198,206 + +0.7 198,273 + -0.9 198,273 + -1.5 198,273 + +2.1 198,282 + -1.9 198,283 - +0.5 198,283 - -1.5 198,283 - +0.5 198,309 + -0.1 198,309 + -0.4 198,309 + -0.2 198,404 - -0.2 198,441 + -1.9 198,441 + +0.1 198,441 + +0.1 198,441 + +0.4 198,441 + -0.1 198,441 + -0.0 198,441 + -0.6 198,442 - -0.9 198,442 - +0.1 198,442 - -1.9 198,442 - +0.1 198,442 - -0.5 198,635 + +0.4 198,636 - +0.1 198,636 - -0.5 198,661 + +0.3 198,709 + +1.4 198,709 + +1.9 198,793 + +0.1 198,793 + -1.5 198,793 + +0.5 198,793 + +0.2 198,793 + -0.5 198,794 - +0.7 198,895 - +1.1 198,981 + +0.9 198,982 - +0.7 198,982 - -0.3
Or see this region's nucleotide sequence