Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4678

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
5,162,323	-		Pf1N1B4_4677	0.76	+0.3
5,162,755	-		Pf1N1B4_4677	0.89	+0.5
5,162,756	+		Pf1N1B4_4677	0.89	-0.5
5,162,756	+				-1.5
5,162,756	+		Pf1N1B4_4677	0.89	+0.5
5,162,756	+				-0.5
5,162,756	+		Pf1N1B4_4677	0.89	-3.3
5,162,756	+		Pf1N1B4_4677	0.89	-0.0
5,162,757	-		Pf1N1B4_4677	0.89	+0.3
5,162,757	-		Pf1N1B4_4677	0.89	-0.5
5,162,911	-				-0.8
5,162,927	+				+0.9
5,162,927	+				+0.6
5,163,064	+				+0.2
5,163,067	-				+0.1
5,163,114	+				-0.9
5,163,124	+				-2.5
5,163,124	+				+1.2
5,163,124	+				+0.5
5,163,444	-		Pf1N1B4_4678	0.15	+0.2
5,163,480	-		Pf1N1B4_4678	0.16	-1.5
5,163,716	+		Pf1N1B4_4678	0.27	+1.1
5,163,717	-		Pf1N1B4_4678	0.27	+0.8
5,163,896	+		Pf1N1B4_4678	0.35	-0.7
5,163,897	-		Pf1N1B4_4678	0.35	-2.9
5,163,995	+		Pf1N1B4_4678	0.39	-0.8
5,163,995	+		Pf1N1B4_4678	0.39	-1.5
5,163,995	+		Pf1N1B4_4678	0.39	+0.5
5,163,995	+		Pf1N1B4_4678	0.39	-0.5
5,163,996	-				+1.1
5,163,996	-		Pf1N1B4_4678	0.39	-0.0
5,163,996	-				+0.5
5,163,996	-		Pf1N1B4_4678	0.39	-2.5
5,164,296	-				-0.5
5,164,325	+				-0.2
5,164,607	+				-0.5
5,164,609	+		Pf1N1B4_4678	0.67	+0.5
5,164,646	+		Pf1N1B4_4678	0.68	+1.8
5,164,647	-				+1.8
5,164,709	+				+1.1
5,164,709	+		Pf1N1B4_4678	0.71	-1.5
5,164,710	-				-1.5
5,164,710	-		Pf1N1B4_4678	0.71	-1.1
5,164,932	-		Pf1N1B4_4678	0.81	-1.5
5,164,932	-		Pf1N1B4_4678	0.81	+0.0
5,165,222	+				-1.5
5,165,353	+				+0.3
5,165,354	-				-0.5
5,165,553	+				-2.1
5,165,554	-				+0.5
5,165,568	+				+1.8
5,165,568	+				+0.1
5,165,569	-				-0.5
5,165,569	-				-0.5
5,165,569	-				+1.7
5,165,569	-				+1.0
5,165,569	-				+0.5
5,165,686	-		Pf1N1B4_4679	0.19	-0.9
5,165,686	-		Pf1N1B4_4679	0.19	-3.1
5,165,686	-		Pf1N1B4_4679	0.19	-0.1
5,165,716	-		Pf1N1B4_4679	0.22	+0.7
5,165,745	+		Pf1N1B4_4679	0.25	+1.2
5,165,746	-				+0.5
5,165,823	+				-1.1
5,165,824	-		Pf1N1B4_4679	0.32	+0.2
5,165,839	+		Pf1N1B4_4679	0.33	-0.2
5,165,839	+		Pf1N1B4_4679	0.33	+1.1
5,165,840	-		Pf1N1B4_4679	0.33	-0.9
5,165,884	+		Pf1N1B4_4679	0.38	-1.5
5,165,885	-		Pf1N1B4_4679	0.38	-0.3
5,165,887	+		Pf1N1B4_4679	0.38	+0.5
5,166,011	+		Pf1N1B4_4679	0.49	+1.1
5,166,331	+		Pf1N1B4_4679	0.79	-0.2
5,166,347	+		Pf1N1B4_4679	0.81	+0.1
5,166,347	+				-0.2
5,166,348	-		Pf1N1B4_4679	0.81	+0.5