Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_4337
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
4,795,190 | - | -0.6 | |||
4,795,190 | - | -1.4 | |||
4,795,190 | - | -0.7 | |||
4,795,195 | - | -0.6 | |||
4,795,197 | - | +0.2 | |||
4,795,266 | + | -0.4 | |||
4,795,267 | - | -1.4 | |||
4,795,267 | - | -2.0 | |||
4,795,267 | - | -0.1 | |||
4,795,400 | + | +1.6 | |||
4,795,469 | + | Pf1N1B4_4336 | 0.34 | -0.4 | |
4,795,469 | + | Pf1N1B4_4336 | 0.34 | +1.3 | |
4,795,470 | - | Pf1N1B4_4336 | 0.34 | -0.4 | |
4,795,470 | - | Pf1N1B4_4336 | 0.34 | -1.4 | |
4,795,580 | + | +1.2 | |||
4,795,580 | + | Pf1N1B4_4336 | 0.51 | -0.4 | |
4,795,759 | - | -0.4 | |||
4,795,809 | - | +1.6 | |||
4,796,007 | + | -0.4 | |||
4,796,140 | + | Pf1N1B4_4337 | 0.18 | -0.4 | |
4,796,141 | - | Pf1N1B4_4337 | 0.18 | +1.0 | |
4,796,189 | + | Pf1N1B4_4337 | 0.24 | +0.9 | |
4,796,189 | + | -0.4 | |||
4,796,603 | - | Pf1N1B4_4337 | 0.72 | +1.9 | |
4,796,709 | + | Pf1N1B4_4337 | 0.84 | +0.6 | |
4,796,710 | - | Pf1N1B4_4337 | 0.84 | -0.4 | |
4,796,710 | - | Pf1N1B4_4337 | 0.84 | +0.2 | |
4,796,819 | + | -0.4 | |||
4,796,819 | + | +0.6 | |||
4,796,819 | + | +0.6 | |||
4,796,819 | + | +1.0 | |||
4,796,820 | - | +0.1 | |||
4,796,820 | - | +1.2 | |||
4,796,864 | + | +0.9 | |||
4,796,864 | + | -0.4 | |||
4,796,864 | + | +0.2 | |||
4,796,864 | + | +0.8 |
Or see this region's nucleotide sequence