Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,208,202	+				+0.4
4,208,258	+				+1.4
4,208,258	+				-0.9
4,208,258	+				-0.1
4,208,259	-				-1.2
4,208,259	-				+0.0
4,208,421	+		Pf1N1B4_3799	0.24	-0.4
4,208,422	-		Pf1N1B4_3799	0.24	-0.2
4,208,422	-		Pf1N1B4_3799	0.24	-0.9
4,208,737	-		Pf1N1B4_3799	0.68	-1.5
4,208,779	+		Pf1N1B4_3799	0.74	-2.2
4,208,844	+		Pf1N1B4_3799	0.83	-1.2
4,208,845	-		Pf1N1B4_3799	0.83	+1.4
4,208,845	-		Pf1N1B4_3799	0.83	+1.0
4,208,847	-		Pf1N1B4_3799	0.83	-0.9
4,208,859	-		Pf1N1B4_3799	0.85	+2.1
4,208,927	-				+0.1
4,208,950	+				+0.1
4,209,038	+				+2.3
4,209,038	+				-0.0
4,209,081	+				-0.4
4,209,081	+				-0.6
4,209,111	-				+1.4
4,209,185	-				-1.2
4,209,191	+				-0.4
4,209,192	-				+2.6
4,209,192	-				-0.0
4,209,267	-				+2.4
4,209,548	+		Pf1N1B4_3800	0.53	+0.2
4,209,549	-		Pf1N1B4_3800	0.53	-1.2
4,209,692	-		Pf1N1B4_3800	0.74	-0.6
4,209,722	+		Pf1N1B4_3800	0.78	+0.4
4,209,723	-		Pf1N1B4_3800	0.78	-1.0
4,209,854	-				+1.8
4,209,888	-				-1.0
4,209,888	-				-0.2
4,209,890	+				-0.4
4,209,891	-				-0.2
4,209,891	-				-0.2
4,209,928	+				-0.2
4,209,928	+				-0.8
4,210,010	+				+3.0
4,210,010	+				+1.6
4,210,010	+				-0.5
4,210,011	-				-2.1
4,210,011	-				+1.8
4,210,011	-				-1.4
4,210,011	-				-1.2
4,210,011	-				+0.1
4,210,011	-				-0.5
4,210,013	-				-0.1
4,210,014	+				+0.8
4,210,014	+				+1.8
4,210,014	+				-1.8
4,210,014	+				+2.1
4,210,014	+				+0.8
4,210,014	+				+1.1
4,210,014	+				+2.1
4,210,015	-				-0.5
4,210,015	-				+1.8
4,210,015	-				+0.3
4,210,015	-				-0.2
4,210,015	-				+0.5
4,210,015	-				+0.8
4,210,015	-				-1.8
4,210,015	-				+0.1
4,210,015	-				+0.1
4,210,015	-				+0.6
4,210,370	+				-0.5
4,210,370	+				-0.6
4,210,370	+				+0.5
4,210,370	+				+0.4
4,210,371	-				-1.8
4,210,371	-				-0.2
4,210,371	-				+0.8
4,210,371	-				-0.2
4,210,371	-				+0.8
4,210,399	+				-1.2
4,210,399	+				-0.2
4,210,399	+				+2.8
4,210,399	+				+0.2
4,210,399	+				-0.9
4,210,399	+				-0.2
4,210,400	-				-0.8
4,210,400	-				-1.2
4,210,426	+				+1.4
4,210,426	+				+2.1
4,210,426	+				+0.8
4,210,427	-				+1.0
4,210,427	-				+1.1
4,210,499	+				+2.4
4,210,499	+				-0.2
4,210,500	-				+1.6
4,210,588	+				+2.1
4,210,729	+		Pf1N1B4_3801	0.71	-2.2
4,210,730	-		Pf1N1B4_3801	0.71	-1.4
4,210,744	+		Pf1N1B4_3801	0.78	+0.8
4,210,745	-		Pf1N1B4_3801	0.79	-1.4
4,210,784	+				-0.2
4,210,785	-				-0.9
4,210,838	-				-0.2