Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,002,225	+		Pf1N1B4_3589	0.37	+2.6
4,002,226	-		Pf1N1B4_3589	0.37	+0.2
4,002,226	-		Pf1N1B4_3589	0.37	-0.3
4,002,226	-		Pf1N1B4_3589	0.37	+0.6
4,002,256	+		Pf1N1B4_3589	0.40	-0.5
4,002,257	-		Pf1N1B4_3589	0.40	+0.1
4,002,402	+		Pf1N1B4_3589	0.54	-1.7
4,002,704	-		Pf1N1B4_3589	0.83	+0.9
4,002,721	-		Pf1N1B4_3589	0.84	-1.6
4,002,721	-		Pf1N1B4_3589	0.84	+0.5
4,002,721	-		Pf1N1B4_3589	0.84	+1.0
4,002,721	-		Pf1N1B4_3589	0.84	-0.1
4,002,721	-		Pf1N1B4_3589	0.84	+1.5
4,002,721	-		Pf1N1B4_3589	0.84	-0.7
4,002,721	-		Pf1N1B4_3589	0.84	-0.9
4,002,721	-		Pf1N1B4_3589	0.84	+0.4
4,002,721	-		Pf1N1B4_3589	0.84	-0.3
4,002,721	-		Pf1N1B4_3589	0.84	-0.0
4,002,721	-		Pf1N1B4_3589	0.84	-0.8
4,002,721	-		Pf1N1B4_3589	0.84	+0.3
4,002,915	-				-1.7
4,002,934	-				+0.0
4,002,934	-				-1.1
4,002,951	+				-0.1
4,002,952	-				-1.2
4,002,952	-				+0.4
4,002,952	-				-2.6
4,002,952	-				-0.8
4,002,952	-				-1.1
4,002,952	-				+0.5
4,002,957	-				-1.6
4,002,957	-				-3.6
4,002,957	-				-1.0
4,002,957	-				-0.3
4,002,957	-				-2.1
4,002,957	-				-0.7
4,002,957	-				-2.0
4,002,957	-				-1.1
4,002,959	-				-1.9
4,003,009	-				-1.3
4,003,009	-				-1.3
4,003,009	-				-0.6
4,003,045	-				-2.1
4,003,089	-		Pf1N1B4_3590	0.33	-2.2
4,003,089	-		Pf1N1B4_3590	0.33	-0.9
4,003,101	-		Pf1N1B4_3590	0.42	+0.9
4,003,101	-		Pf1N1B4_3590	0.42	-0.1
4,003,128	+		Pf1N1B4_3590	0.62	-1.7
4,003,129	-		Pf1N1B4_3590	0.62	-2.1
4,003,145	+		Pf1N1B4_3590	0.74	-0.8
4,003,145	+		Pf1N1B4_3590	0.74	-1.1
4,003,145	+		Pf1N1B4_3590	0.74	-1.3
4,003,145	+		Pf1N1B4_3590	0.74	-1.1
4,003,145	+		Pf1N1B4_3590	0.74	-2.3
4,003,146	-		Pf1N1B4_3590	0.75	+0.6
4,003,146	-		Pf1N1B4_3590	0.75	-1.1
4,003,146	-		Pf1N1B4_3590	0.75	-1.7
4,003,146	-		Pf1N1B4_3590	0.75	+0.5
4,003,172	+				+1.5
4,003,172	+				-0.1
4,003,172	+				-0.8
4,003,172	+				-0.8
4,003,173	-				-0.9
4,003,173	-				-3.9
4,003,173	-				-2.1
4,003,173	-				-0.3
4,003,173	-				+0.3
4,003,173	-				-0.9
4,003,173	-				+0.1
4,003,173	-				-1.0
4,003,173	-				-1.3
4,003,444	+		Pf1N1B4_3591	0.32	-1.1
4,003,445	-		Pf1N1B4_3591	0.32	-1.1
4,003,466	+		Pf1N1B4_3591	0.34	-1.3
4,003,466	+		Pf1N1B4_3591	0.34	-1.2
4,003,467	-		Pf1N1B4_3591	0.34	-0.1
4,003,467	-		Pf1N1B4_3591	0.34	-0.1
4,003,481	+		Pf1N1B4_3591	0.36	-0.4
4,003,481	+		Pf1N1B4_3591	0.36	+0.5
4,003,481	+		Pf1N1B4_3591	0.36	-0.4
4,003,481	+		Pf1N1B4_3591	0.36	-2.1
4,003,481	+		Pf1N1B4_3591	0.36	-0.4
4,003,482	-		Pf1N1B4_3591	0.36	-0.5
4,003,482	-		Pf1N1B4_3591	0.36	-0.9
4,003,482	-		Pf1N1B4_3591	0.36	-2.5
4,003,482	-		Pf1N1B4_3591	0.36	-1.8
4,003,547	+		Pf1N1B4_3591	0.44	-1.1
4,003,918	+		Pf1N1B4_3591	0.86	-1.3
4,003,918	+		Pf1N1B4_3591	0.86	-0.6
4,004,033	+				-1.8
4,004,033	+				-1.9
4,004,033	+				-1.6
4,004,033	+				+1.3
4,004,033	+				-0.7
4,004,033	+				-2.6
4,004,034	-				-1.2
4,004,034	-				-2.3
4,004,034	-				-0.5
4,004,034	-				-1.6
4,004,034	-				-1.5
4,004,034	-				+0.9
4,004,034	-				-0.9
4,004,034	-				-0.1
4,004,034	-				-1.6
4,004,034	-				-0.4
4,004,034	-				-0.1
4,004,050	+				+1.0
4,004,050	+				-0.1
4,004,050	+				-1.7
4,004,051	-				-0.1
4,004,051	-				+0.5
4,004,083	+				+0.9
4,004,097	-				+0.1
4,004,163	-				-1.0
4,004,163	-				-0.1