Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3253

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,642,138	+		Pf1N1B4_3251	0.77	+0.4
3,642,138	+		Pf1N1B4_3251	0.77	-0.4
3,642,138	+		Pf1N1B4_3251	0.77	+0.2
3,642,138	+		Pf1N1B4_3251	0.77	-0.8
3,642,139	-		Pf1N1B4_3251	0.77	-0.4
3,642,139	-		Pf1N1B4_3251	0.77	-0.0
3,642,139	-		Pf1N1B4_3251	0.77	-0.6
3,642,139	-		Pf1N1B4_3251	0.77	+2.3
3,642,195	-		Pf1N1B4_3251	0.82	+0.4
3,642,615	-		Pf1N1B4_3252	0.63	+0.7
3,642,615	-		Pf1N1B4_3252	0.63	-1.2
3,642,686	-		Pf1N1B4_3252	0.85	-2.8
3,642,707	-				-2.0
3,642,707	-				+3.0
3,642,709	+				-0.6
3,642,710	-				-0.4
3,642,760	+				+1.6
3,642,808	+				-1.4
3,642,851	-				+0.7
3,642,852	+				+1.6
3,642,876	-				-1.6
3,642,876	-				-0.4
3,642,876	-				-0.0
3,642,876	-				-1.6
3,642,876	-				+1.3
3,642,893	+				-0.0
3,642,893	+				+0.1
3,642,893	+				-0.4
3,642,893	+				-0.0
3,642,893	+				+0.7
3,642,893	+				+1.0
3,642,893	+				+0.7
3,642,893	+				-2.4
3,642,894	-				+1.3
3,642,894	-				-0.0
3,642,894	-				-1.4
3,642,894	-				-1.6
3,642,894	-				+0.5
3,642,894	-				+1.6
3,642,894	-				-0.0
3,642,951	-		Pf1N1B4_3253	0.11	-0.0
3,643,160	+				-0.6
3,643,161	-		Pf1N1B4_3253	0.48	+1.3
3,643,161	-		Pf1N1B4_3253	0.48	+1.0
3,643,388	+		Pf1N1B4_3253	0.87	+0.3
3,643,388	+		Pf1N1B4_3253	0.87	+1.6
3,643,388	+		Pf1N1B4_3253	0.87	+1.6
3,643,388	+		Pf1N1B4_3253	0.87	+0.6
3,643,388	+		Pf1N1B4_3253	0.87	+0.6
3,643,389	-		Pf1N1B4_3253	0.87	+1.6
3,643,421	+				-0.0
3,643,421	+				-0.6
3,643,461	-				-0.0
3,643,881	+				-0.0
3,643,882	-		Pf1N1B4_3254	0.40	+1.4
3,644,156	-		Pf1N1B4_3254	0.75	-0.4
3,644,337	-				-1.0
3,644,337	-				-1.0
3,644,356	+				-0.0
3,644,356	+				-1.0
3,644,356	+				-1.6
3,644,357	-				-0.5
3,644,357	-				-1.6
3,644,357	-				-0.6
3,644,357	-				+0.4