Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_3241

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,627,261	+		Pf1N1B4_3240	0.78	-0.0
3,627,261	+		Pf1N1B4_3240	0.78	+1.6
3,627,262	-		Pf1N1B4_3240	0.78	+0.5
3,627,262	-				-0.0
3,627,262	-		Pf1N1B4_3240	0.78	+0.6
3,627,386	-		Pf1N1B4_3240	0.88	+0.1
3,627,396	+		Pf1N1B4_3240	0.89	-1.0
3,627,396	+		Pf1N1B4_3240	0.89	-1.0
3,627,510	+				-0.9
3,627,510	+				-1.0
3,627,511	-				+1.0
3,627,511	-				+1.4
3,627,511	-				+1.2
3,627,549	-				+1.6
3,627,554	+				+2.0
3,627,554	+				+0.3
3,627,554	+				-0.0
3,627,554	+				-0.0
3,627,555	-				+1.0
3,627,570	-				-1.0
3,627,685	+				+1.8
3,627,685	+				-0.0
3,627,686	-				-0.0
3,627,767	+				+3.3
3,627,807	+				+1.0
3,627,812	-				-0.0
3,628,158	-				-0.8
3,628,228	+		Pf1N1B4_3241	0.30	-1.2
3,628,273	+		Pf1N1B4_3241	0.47	-0.0
3,628,273	+		Pf1N1B4_3241	0.47	-0.3
3,628,274	-		Pf1N1B4_3241	0.47	-0.0
3,628,277	+		Pf1N1B4_3241	0.48	-1.4
3,628,478	+				+1.6
3,628,478	+				-0.4
3,628,478	+				-0.0
3,628,481	+				+0.6
3,628,481	+				+2.0
3,628,481	+				-0.0
3,628,482	-				-0.2
3,628,482	-				-0.8
3,628,565	+				-0.0
3,628,566	-				-0.0
3,628,747	+		Pf1N1B4_3242	0.36	-2.4
3,628,800	-		Pf1N1B4_3242	0.49	+1.0
3,628,800	-				-2.0
3,628,803	+		Pf1N1B4_3242	0.50	+0.6
3,628,803	+		Pf1N1B4_3242	0.50	-0.2
3,628,803	+		Pf1N1B4_3242	0.50	-1.6
3,628,803	+		Pf1N1B4_3242	0.50	-1.6
3,628,803	+		Pf1N1B4_3242	0.50	-0.0
3,628,803	+		Pf1N1B4_3242	0.50	+0.1
3,628,804	-		Pf1N1B4_3242	0.50	+0.5
3,628,804	-		Pf1N1B4_3242	0.50	+0.3
3,628,948	+		Pf1N1B4_3242	0.87	-1.4
3,628,949	-		Pf1N1B4_3242	0.87	-2.0
3,629,174	-		Pf1N1B4_3243	0.14	-0.3
3,629,174	-		Pf1N1B4_3243	0.14	-0.0
3,629,182	+		Pf1N1B4_3243	0.14	+0.1
3,629,235	-		Pf1N1B4_3243	0.19	-1.3
3,629,237	-		Pf1N1B4_3243	0.19	-1.4
3,629,271	-		Pf1N1B4_3243	0.22	-0.5